Gene Ava_B0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0171 
Symbol 
ID3677899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand- 
Start bp191070 
End bp191981 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content38% 
IMG OID637714878 
Producthydrogenase accessory protein HypB 
Protein accessionYP_320072 
Protein GI75812453 
COG category[K] Transcription
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 
TIGRFAM ID[TIGR00073] hydrogenase accessory protein HypB 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.452603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTGTAA CCTGCGGTTG TTCTGATGAT GCTGAAGTCA AAATCATCAA CACTGAAACA 
AATGAAGTAG CAATAATTAG CTCCCAAGAT GAGCATCATT ACCACACTCA TACTTCACCT 
AAAGATACAG CGATCGCCCA TTCTCACAAT CATGATTCTC ATCATGTTCA CACTCACACT 
TTACCAGATG GCACTGTAGT TACGCATTCT CACAGTCATA ATTCCATCTC AGAAGCATCT 
CAGATTCATG CTCAAGTACA CAGCACAACT ATATCTTTAG AACAAGATAT CTTAGCAAAA 
AATAATTTAA TAGCAGCCCA AAATCGGGGA TGGTTTAAAG GTCGCAACAT CATTGCTTTA 
AATCTAATGA GTTCTCCAGG TTCAGGAAAA ACAACACTAT TGACTCGCAC TATTAATGAT 
TTAAAACATC AGTTGTCTAT CAGTGTTATT GAGGGAGATC AAGAAACGAT TAATGATGCT 
AAGAAAATAA AAGAGACAGG CTGTAAAGTA GTACAAATTA ACACAGGTAC AGGCTGTCAT 
TTAGATGCAG CAATGGTAGA AAGGGGTTTG CAACAATTAA ATCCACCTTT GAATTCAGTC 
GTGATGATTG AGAATGTTGG TAACTTAGTT TGTCCAGCAT TATTTGATTT AGGCGAACAG 
GCAAAAGTTG TCATTCTCTC TGTGACTGAA GGCGAAGATA AGCCAATTAA ATATCCGCAT 
ATGTTCCGCG CTAGTGAGGT GATGATTCTC ACCAAAATTG ATTTACTACC TCATGTGCAG 
TTTGACGTTC AGCGTTGTAT AGAATACGCC CAGCAAGTCA ATCCTCAAAT TCAGGTTTTT 
CAAGTTTCAG CGTTAACTGG AACTGGGTTA GAGAGTTGGT ATAAGTGCTT ATCACAAAGG 
GTTAGTAACT GA
 
Protein sequence
MCVTCGCSDD AEVKIINTET NEVAIISSQD EHHYHTHTSP KDTAIAHSHN HDSHHVHTHT 
LPDGTVVTHS HSHNSISEAS QIHAQVHSTT ISLEQDILAK NNLIAAQNRG WFKGRNIIAL 
NLMSSPGSGK TTLLTRTIND LKHQLSISVI EGDQETINDA KKIKETGCKV VQINTGTGCH 
LDAAMVERGL QQLNPPLNSV VMIENVGNLV CPALFDLGEQ AKVVILSVTE GEDKPIKYPH 
MFRASEVMIL TKIDLLPHVQ FDVQRCIEYA QQVNPQIQVF QVSALTGTGL ESWYKCLSQR 
VSN