Gene Ava_B0165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0165 
Symbol 
ID3677893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand
Start bp184406 
End bp185653 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content38% 
IMG OID637714872 
Productaminotransferase 
Protein accessionYP_320066 
Protein GI75812447 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4992] Ornithine/acetylornithine aminotransferase 
TIGRFAM ID[TIGR01885] ornithine aminotransferase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGCAG CAAACATAAG TCTGGAAATT TCCAGCTTCG ACACTATGAA TACCCAGGAT 
TATATTGAGC TAGAACAGCA ATATGGTGCT GATAATTACC ATCCTTTAGA TGTAGTTATT
ACCAAAGGAG AAGGTGTGTG GGTATGGGAT ATAGAAGGTA AAAAATACCT CGATTTTCTT
TCAGCTTATT CAGCATTAAA TCAGGGTCAT TGTCATCCCA AAATTCTTCA AGCAATGATA
AAACAAGCTC AACAAGTTAC ACTGACTTCT AGAGCTTTTC GTAATGACCA ATTAGGAAAA
TTCTATCAAA AGCTTTGTCA AATTTCTGGC TTACCTAAAG TGCTACCCAT GAATTCGGGA
GCCGAAGCTG TGGAAACAGC TATTAAAGCC ATTCGTAAAT GGGCTTATAA AGTAAAAGGC
ATACCAGAAA ATCAAGCAGA AATTATCGTT TGTAGTAATA ATTTTTCTGG ACGCACTATT
AGTTTAATCA GTTTCTCTAC AGAAGAACAA TATCAAGATG GATTTGGGCC TTTAACTACT
GGGTTTAAAG TTATTCCTTT TGGTGATGCT CAAGCATTAG AACAAGCTAT TACTCCTAAC
ACTGCGGCAT TTTTGGTAGA ACCAATTCAG GGTGAGGGAG GTATTATTGT TCCGCCTCAT
GGGTTTTTAA AGCAAGCTGA ACAAATCTGT CGCCATCATC ATGTCTTACT GGTTTTTGAT
GAAATCCAAA CGGGCTTGGG AAGAACAGGT AAAATGTTTG CCCATCAATA TGAGAATGTT
AAGCCAGATG GCATAACTGT AGGTAAAGCT TTATCTGGTG GATTTTATCC CATTTCTGCA
TTTATTTCTA CAGAGGAAGT GATGGGTATA TTTCAACCAG GGGATCATGG TAGTACCTTT
GGGGGAAATC CTTTAGCTGC TGCTATTGGC ATTGCAGCAC TTGATGTTCT TATAGAAGAA
AAATTACCAG AAAAAGCCTT AAAACTAGGG GAATATTTTA TAGAGAAATT ACAATCAATA
GAAAGTACAT ATATCAAAGA AGTACGCGGC AAAGGTTTAT TAATTGGTAT GGAATTGTAC
CCCGAAGCTG GTGGTGCAAG GCGTTTTTGT AAAGCTTTAG CTAAAGAGGG GTTATTAGCT
AAAGAGACTA GAGATAATGT CATTCGTTTT GCTCCACCCT TAGTTATTTC CGAAGATGAA
ATAGATTGGG CATTAGAGAA AATTGAGCGA GTTTTAACCA CCACTTAA
 
Protein sequence
MQAANISLEI SSFDTMNTQD YIELEQQYGA DNYHPLDVVI TKGEGVWVWD IEGKKYLDFL 
SAYSALNQGH CHPKILQAMI KQAQQVTLTS RAFRNDQLGK FYQKLCQISG LPKVLPMNSG
AEAVETAIKA IRKWAYKVKG IPENQAEIIV CSNNFSGRTI SLISFSTEEQ YQDGFGPLTT
GFKVIPFGDA QALEQAITPN TAAFLVEPIQ GEGGIIVPPH GFLKQAEQIC RHHHVLLVFD
EIQTGLGRTG KMFAHQYENV KPDGITVGKA LSGGFYPISA FISTEEVMGI FQPGDHGSTF
GGNPLAAAIG IAALDVLIEE KLPEKALKLG EYFIEKLQSI ESTYIKEVRG KGLLIGMELY
PEAGGARRFC KALAKEGLLA KETRDNVIRF APPLVISEDE IDWALEKIER VLTTT