Gene Ava_B0163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0163 
Symbol 
ID3677844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand
Start bp182023 
End bp183024 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content42% 
IMG OID637714870 
ProductABC transporter-like 
Protein accessionYP_320064 
Protein GI75812445 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTTGA GGACTCAGGA TTTATGTATT GGTTATAAGT CGGGGAAGGG GTTGCGGTGT 
GTGGCGAGGG ATATTTCTGT GTGTCTGGAA GCTGGGGAAT TGGTGTGTTT ACTTGGCCCT
AATGGTGCGG GTAAGTCTAC CTTACTGCGA TCGCTCGCCG GAATGCAACC ACCTCTAGCG
GGTCAGGTGC GGCTTTTGGG TGATGATATC TATAAGTTAG CACCGCAGGA TTTAGCCAAG
CGGTTGAGTT TGGTGCTGAC GGAAAGGGTG GATGTGGGTA TGTTATCGGC TTATACTCTG
GTGAGTTTGG GACGACATCC TTATACTGAC TGGTGGGGAA AATTAACGCC TGAAGATGAG
GCTATAGTAC ATTGGGCAAT AAAATCTGTA GGTGCATTAA ATTTAGCTGC GCGTCAAGTT
AGCGAACTCA GTGATGGTGA ACGTCAAAAA ATTATGATTG CACGTGCTTT AGCACAGTCG
CCGATGGTGA TGTTGCTAGA TGAACCGACG GCATTTTTAG ATTTACCACG GCGGGTGGAA
ATTATGCAAC TGTTACGCCA GTTAGCACGA GAAAATCAGC AAGCGATTTT ACTTTCTACC
CATGATTTAG ATTTAGCTTT GCGTCTAGCT GACCAAGTTT GGTTATTAAC ATCTGAGGGA
ATTTTACACA TTGGCGCACC AGAAGATTTG GTATTAAGTG GTGCTTTTGC TGATACTTTC
CGCAGTGAAG GTGTAGAGTT TAATATTTTT TCTGGTGAGT TTCATTTACA TACACACCAA
AAAGGCAATA TTAATTTTAT CGGTGAGGGT ATCGCTGCGG TGTGGACGAT GCGTGCTTTG
AAACGTGCAG GATTTCAAGT CTTTCAAAGT GAAAATAATT TACCAATTTC AATAGAAGTA
ATATCAAATT CAAGAAAATT GATGTGGAAA ATTACCAACA GCCAGACCGT AAATATTTAT
AATTCACTGT ACGATGTAAT TAAATATATA AATTTATTAT AG
 
Protein sequence
MILRTQDLCI GYKSGKGLRC VARDISVCLE AGELVCLLGP NGAGKSTLLR SLAGMQPPLA 
GQVRLLGDDI YKLAPQDLAK RLSLVLTERV DVGMLSAYTL VSLGRHPYTD WWGKLTPEDE
AIVHWAIKSV GALNLAARQV SELSDGERQK IMIARALAQS PMVMLLDEPT AFLDLPRRVE
IMQLLRQLAR ENQQAILLST HDLDLALRLA DQVWLLTSEG ILHIGAPEDL VLSGAFADTF
RSEGVEFNIF SGEFHLHTHQ KGNINFIGEG IAAVWTMRAL KRAGFQVFQS ENNLPISIEV
ISNSRKLMWK ITNSQTVNIY NSLYDVIKYI NLL