Gene Ava_B0152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0152 
Symbol 
ID3677939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand
Start bp170916 
End bp171971 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content46% 
IMG OID637714859 
Producttransport system permease protein 
Protein accessionYP_320053 
Protein GI75812434 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTAA GGAGATTTCA AAAAACACGC TATCAACTAT TAATAATTAG CTTAATTATT 
ATACTTATTA TCTCCATTAC GTTAGCTGTG ATGATTGGGC CAGTACCAAT CCCGCCTTTA
AGAGTCTGGC AAATAGCACT TGCCCAATTA TTCCCCAATT TAACAGGAGA TTGGACACCT
GCACAGGTGC AAATTGTGTG GTTAATTCGC TTCCCGCGTG TGCTGTTGGC TTTTTTTGTC
GGTGCTGGAC TGTCGGTGGT GGGTGTGACA ATGCAGGCTT TGGTGCGAAA TTCCCTGGCT
GATCCTTATA TCCTTGGCGT TTCCTCTGGT GCGTCGGTGG GGGCTGTGTT GGTTATTTTG
TTTGGGGTTT TCGCTTCACT GGGGATATAT GCGGTATCTG TGGGGGCGTT TCTGGGGGCG
ATGTTGTCGT TTGTCGTGGT TTTTTTGTTG GCGCAGCGTC AGGGAAGGAT TTCTTCGACT
CGGTTAATTT TAGCTGGTGT GGCGATATCT TACTTATTCT CTGCCGTTAC CAGTTTTTTG
ACGTTGAAAG CTGGTAGTGG TGATGCGGCG CGGCGAGTAT TATTTTGGTT ATTGGGGGGA
CTGTCGGGGA CAAAGTGGGC TGATTTGATT TTACCGATGG GATCTCTGGG AATCGGGATG
GTGTACTTAT TATTGCAGAG GCGATCGCTC AATGCTTTAC TCATCGGTGA AGAAACAGCA
ATGACTTTGG GAACAGATAG CGATCGCTTC CGTAAGCAGT TATTTTTGGT AACATCACTC
TTAACTGGGG TGATGGTGGC TGTAAGTGGG GCGATTGGTT TTGTGGGTTT AATGATACCT
CATAGCGTCC GCTTACTCGT TGGTTCAGAT CATCGCCGCG TCCTACCTGT AAGCCTGTTA
CTAGGGGGAA TTTTCCTGAT TTTGGCAGAT GTATTAGCAC GCATGATTAT TGCCCCAGAG
GAATTACCTA TCGGTATTAT TACGGCACTT TTCGGTACTC CCTTTTTCAT TTGGTTGATG
CAGCTTTCTC CAAAAATATT AGGAGGGGGA CGATGA
 
Protein sequence
MKLRRFQKTR YQLLIISLII ILIISITLAV MIGPVPIPPL RVWQIALAQL FPNLTGDWTP 
AQVQIVWLIR FPRVLLAFFV GAGLSVVGVT MQALVRNSLA DPYILGVSSG ASVGAVLVIL
FGVFASLGIY AVSVGAFLGA MLSFVVVFLL AQRQGRISST RLILAGVAIS YLFSAVTSFL
TLKAGSGDAA RRVLFWLLGG LSGTKWADLI LPMGSLGIGM VYLLLQRRSL NALLIGEETA
MTLGTDSDRF RKQLFLVTSL LTGVMVAVSG AIGFVGLMIP HSVRLLVGSD HRRVLPVSLL
LGGIFLILAD VLARMIIAPE ELPIGIITAL FGTPFFIWLM QLSPKILGGG R