| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_B0150 |
|---|
| Symbol | |
|---|
| ID | 3677937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007410 |
|---|
| Strand | + |
|---|
| Start bp | 167243 |
|---|
| End bp | 169774 |
|---|
| Gene Length | 2532 bp |
|---|
| Protein Length | 843 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637714857 |
|---|
| Product | TonB-dependent siderophore receptor |
|---|
| Protein accession | YP_320051 |
|---|
| Protein GI | 75812432 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.13947 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGTGA AACGACATAG TTTATTTGCT TATCTGTGGC TGAGTTATAC CATATCAATT
TTTAATACAT TCCCTGCCTA TTCACAAGAA ATAGCTATCA AAGACATACC CCAATTAAGT
GAGATACAGC TTCCTCACAC CAGCATTAAA GAATTATTCG CCCAGCAACA AAATACAGTT
ATTCAAGTGA CAGGAGTACG CCTCAATCAA ACTCCTAACA GCTTAGAAAT AATCTTAGAA
ACTCCTGCAT CTGATAAATT GCAAGTTACT AACAAGAGTG AAGGGAATAA CTTTATTATC
GATATTCCTA ACGCGCAATT GAGTTTACCT AATGGAAATT CATTTCGTCA AGAAAAACCA
TTTGCAGGAA TTACAGAAGT AGTAGTTACA AATCAAGATG CAAATAGTAT CCGGGTGAAA
GTAACGGGTG AAACCGCTAT ACCAAAAGTT GAGTTAGATG ACAGCGATGC AGGTTTAATT
TTCATCGTCA CACCAGTTAT ATCACCTACT AGCGAAACAC CAGCAAATGA ACCCATTGAA
TTGACGGTGA CAGGAGAACG TGACACCTAT TCCGTACCCG ATGCTATCAC CGCAACCAGG
ACTGATACGC CACTGCGAGA TATTCCCCAA TCAATTCAAG TTATTCCGCG TCAGGTAATT
GAAGATAGAA ATGTTGTGCG TCTTTCGGAA TTAGCAGATA ACGTTAGCGG TGTCCAACCA
GAACGGGGAT ATGGGGGTGT GTCTTCCCAA GGTTATCGAA TTAGAGGGTT TTTAACTAAC
TTTGAAACTC TCAGAAATGG GTTTCCCGAC TACGGTTATT TTAGTCCTCG TGATGTGGCG
AATATCGAAA GAGTCGAGTT TCTCAAAGGG CCAGCAGCCG TACTTTATGG AGGTAGTCCC
ACACAATATG CTGGTGGAAG TGGGTTAGTA AATACGGTGA CGAAAAAGCC ACTAGAAACA
CCTTACTATA ATGCTAGTTT GACCTACGGT AGTTATAACT TTATTCGTCC TACTTTAGAT
ATTACAGGCC CTTTAACAGA TGACAAATCA GTATTATATC GGCTGAATGT TGCTTACGAA
AATGCTGATA GTTTCCGCGA TTTTGTCAGA AATGATAGCT TCTTTATTTC TCCGGTAATC
GAGTGGAAAG TCGGAGAAAA GACCAAAATA ACTTTTGAAT TTGAACATCA AAAATATAAT
CTGGTATTTG ACCAAGGACT ACCCATTCAG CCAGAATCTT TGAGGCTTCC GAGAAGTCGG
TTTTTAGGAG AGCCAAATTT TGCTAATGGT AATTTTACTT TTAATTCGTT TACCTACACT
CTTGATAGCG AATTTAGTAA AGATTGGTCA TTTCGTCAAG GGTTTAATGT CCTGGGAGCA
AAATTAGATG ATGCTAAATA CACATATTAT GGTTCTTTAG AAGATGATAG ACGTACCCTG
AATCGGTTTA TTACCGCATC GGAAGAGGAA CACAAAAATA TAACTTTCCA AAATCAAATT
TCTGGTAAAT TCTCTACAGG TTCAATTCGT CACAATGTTT TATTTGGTGT GGATTTAGCC
TATAACTTAT TTAATTATAT ATTTGCCCCA GATGAGGAAT TACCAATAGA TATTTTTAAC
CCCCAATATG GTGGAACTCC TATTTCAGTT GGTGGTGAAC CATTTGGAAG GAGAATTGTT
TCTCAAAATG TGGGTGTGTT TGCTCAAAAC TTGGTTGAAT TAACGCCAAA CTTCAAAATT
TTGTTGGGTG GACGCTTCGA TTTTAACGAA TACAGTCGGG AAGATAGAGT TACGAATGAA
TTATTAAATG AGCAGTCTGA TAGTAGATTT TCTCCTAGAG TTGGACTTGT TTATCAACCT
ACGAAAACTA CTTCCTTGTA CTTTAATTGG ACAAACGGAT TTTCGCCGCA ATTTCAAGCA
CGTGGCCGCA CAAATGAGCA ATTTGAACCT CAAAATACTG AACAATTTGA AGTAGGAGTT
AAGCAGAATT TTCTCAATGA TAAGCTTTCG GCGACTTTAG CATTTTTCCA AGTGACTAAG
CAAAATGTTT TAACACCAGA TCCAGTAGAT TCTAGATTTA GTGTGCAAAC AGGAGAACAG
GAAAGTAAGG GGATTGAATT TGATATTGCT GGGGAGATTT TACCAGGATG GAAAGTAATT
GCTAACTATG CCTATATTGA TGGTACGGTG ACAAAAGATA ATAGAATTCC TGTGGGAGAT
AGATTAGTTG GTGTACCGGA ACATAGTTTA GGATTGTGGA CGACTTACGA ATTTCAAACA
GGAAGTCTCC AGGGTTTAGG TTTGGGATTG GGTTTGTATT ATGTTGGAGA ACAGGAGGTA
AGATTACCCA ATACTTTTGA AGTTCCGAGT TATGTCCGCG CTGATGCTTC TGTTTTTTAT
CGGCGGAATA ACTTCAGATA TGCTCTCAAT TTTAAGAATA TTTCTAATGT GAAATATTAT
GATTTAGATG GTTATAATAT CGACCCAGCC GCACCATTTA CTGTGTTGGG AACGATATCG
GTTGAGTTTT AA
|
|---|
| Protein sequence | MRVKRHSLFA YLWLSYTISI FNTFPAYSQE IAIKDIPQLS EIQLPHTSIK ELFAQQQNTV
IQVTGVRLNQ TPNSLEIILE TPASDKLQVT NKSEGNNFII DIPNAQLSLP NGNSFRQEKP
FAGITEVVVT NQDANSIRVK VTGETAIPKV ELDDSDAGLI FIVTPVISPT SETPANEPIE
LTVTGERDTY SVPDAITATR TDTPLRDIPQ SIQVIPRQVI EDRNVVRLSE LADNVSGVQP
ERGYGGVSSQ GYRIRGFLTN FETLRNGFPD YGYFSPRDVA NIERVEFLKG PAAVLYGGSP
TQYAGGSGLV NTVTKKPLET PYYNASLTYG SYNFIRPTLD ITGPLTDDKS VLYRLNVAYE
NADSFRDFVR NDSFFISPVI EWKVGEKTKI TFEFEHQKYN LVFDQGLPIQ PESLRLPRSR
FLGEPNFANG NFTFNSFTYT LDSEFSKDWS FRQGFNVLGA KLDDAKYTYY GSLEDDRRTL
NRFITASEEE HKNITFQNQI SGKFSTGSIR HNVLFGVDLA YNLFNYIFAP DEELPIDIFN
PQYGGTPISV GGEPFGRRIV SQNVGVFAQN LVELTPNFKI LLGGRFDFNE YSREDRVTNE
LLNEQSDSRF SPRVGLVYQP TKTTSLYFNW TNGFSPQFQA RGRTNEQFEP QNTEQFEVGV
KQNFLNDKLS ATLAFFQVTK QNVLTPDPVD SRFSVQTGEQ ESKGIEFDIA GEILPGWKVI
ANYAYIDGTV TKDNRIPVGD RLVGVPEHSL GLWTTYEFQT GSLQGLGLGL GLYYVGEQEV
RLPNTFEVPS YVRADASVFY RRNNFRYALN FKNISNVKYY DLDGYNIDPA APFTVLGTIS
VEF
|
|---|
| |