Gene Ava_B0149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0149 
Symbol 
ID3677936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand
Start bp165995 
End bp167011 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content37% 
IMG OID637714856 
Productperiplasmic binding protein 
Protein accessionYP_320050 
Protein GI75812431 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTC CTGGTTTTAC TTGGCGGCGA AATCGCTATA CAATTTTTTT TGTGACTACT 
TTATTAGTAA TCATTGCTGC TTGTCAAATG GGGTTAGAAA ATCCCAAAAA TTTGCCATCT
ATAACTGCTA ATTTTACCCC AGTGACGATT GAGAATTGTG GTGTTACTAT TACCTACAAA
CAACCACCAA AAAGAGTAGT TACTCTCAAC CAACCTGCAA CTGAAATCAT GTTAGCGTTG
GGTTTAGAGA CGCAGATGGT TGGTACAGCT TATTTAGACG ATCGCATTCT GCCAGAATAC
CAAAAAACCT ACTCGCAAAT TCCTGTCATT GCCGATAAAT ATCCCTCAAA AGAAGTCTTA
TTAGGTGCTG AACCAGATTT CGTCTATGGT TCATTTCCTG GTGCTTTCGG TAAGGATGCA
GTTAGTGGAC GTAAAGATTT ACTGAGTTTA GGAATTAACT CCTATTTAGC GGAAGGTGCT
ATCGAAGTTT GTCCGAATAA AAGGGAATTG CTAGAGAATA TTTACAATGA AATTGCAGAA
ATTGGTCAGA TTTTTGGAGT GAGCGATCGC GCTGTTAAAT TAATTAACAA TTTAAAACAA
GAACTTCAAG ATACTCAAAC AAAGCTAGGA CAAATTAATC CTCCTAAATC TGTATTTTGG
TACGCCAGTG AAAGTCCACC TTATACAATT ACTATTGATA GTTTACCAAA TAAAATGTTG
TCATTGGCGG GTGGTAGGAA TATATTTCAA GAAAAAGCGA ATGGTACTTA TATAACAGTT
AATTGGGAAG ATGTAATTAA CCACAATCCC GAAACAATTA TTCTCAGTGA TGCGAGTTGG
TCGCCTGCGA AAGAACAGCG ACAATTATTT CTCACAAATC CCGCCTATGG AAAAATTAGT
GCAGTTCAAA AAGATAAATT CATCGTTATT GATTACAGCT ACAGTACATC CGGTGTCAGG
TTTGCTCAAG GAGTTAAAAT ATTAGCTCAA GCCTTGTACC CAGAGAAATT TAAATGA
 
Protein sequence
MKLPGFTWRR NRYTIFFVTT LLVIIAACQM GLENPKNLPS ITANFTPVTI ENCGVTITYK 
QPPKRVVTLN QPATEIMLAL GLETQMVGTA YLDDRILPEY QKTYSQIPVI ADKYPSKEVL
LGAEPDFVYG SFPGAFGKDA VSGRKDLLSL GINSYLAEGA IEVCPNKREL LENIYNEIAE
IGQIFGVSDR AVKLINNLKQ ELQDTQTKLG QINPPKSVFW YASESPPYTI TIDSLPNKML
SLAGGRNIFQ EKANGTYITV NWEDVINHNP ETIILSDASW SPAKEQRQLF LTNPAYGKIS
AVQKDKFIVI DYSYSTSGVR FAQGVKILAQ ALYPEKFK