Gene Ava_B0134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0134 
Symbol 
ID3677638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand
Start bp151902 
End bp152558 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content43% 
IMG OID637714841 
Productvon Willebrand factor, type A 
Protein accessionYP_320035 
Protein GI75812416 
COG category[R] General function prediction only 
COG ID[COG4245] Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.864003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGTAG GACTGCCTGA GTTTGTGGAA AATCCAGAAA ATCGTTGCCC AGTAATTTTA 
TTACTTGATA CGTCAGGTTC TATGTCAGGA CAGCCTATCC AAGAGTTAAA TCGTGGGCTT
GCTACATTTA AAGAAGATGT CATCAAAGAT TCACAAGCAT CGTTAAGTGT TGAAGTGGCG
ATTATTACAT TTGGCCCTGT ACGATTAGTG CAAGACTTTG TAAACATCGA TCAATTCACA
CCTCCGCAAT TGGAAGCAGA AGGCGTAACC CCTATGGGTG AAGCAATTGA ATATGCTTTA
GATTTATTGG AAACCAGAAA GTCTGCATAC AAAGAGAACG GCATTTTGTA CTATCGCCCT
TGGATATTTC TGATTACAGA TGGAGCGCCA ACAGATTATT ACCATTTGGC AGCACAAAGA
GTAAAAGAGG CTGAAGCTAA TCGCAGATTA TGTTTTTTCA CCGTTGGCGT ACAGGGGGCT
GATTTCAACA AACTCAGACA GATTGCACCA GCAGAGCGTC CGCCAGTGAT ACTCAATGGA
TTAGATTTCC GCTCACTGTT TGTTTGGCTA TCTACTTCCA TGAAACGAGT TTCTAGCGGC
AAGATTGGGG AAGCTGTAGC GCTACCTCCT GTCGGATGGG GTCAGATTAC CACTTAG
 
Protein sequence
MPVGLPEFVE NPENRCPVIL LLDTSGSMSG QPIQELNRGL ATFKEDVIKD SQASLSVEVA 
IITFGPVRLV QDFVNIDQFT PPQLEAEGVT PMGEAIEYAL DLLETRKSAY KENGILYYRP
WIFLITDGAP TDYYHLAAQR VKEAEANRRL CFFTVGVQGA DFNKLRQIAP AERPPVILNG
LDFRSLFVWL STSMKRVSSG KIGEAVALPP VGWGQITT