| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_B0117 |
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| Symbol | |
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| ID | 3677660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007410 |
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| Strand | + |
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| Start bp | 133198 |
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| End bp | 135042 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637714824 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_320018 |
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| Protein GI | 75812399 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.145881 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAGAAA AGAAAGTTAG CCAAGGTGAA CAAAATAATC TGTTTGAGGT GACACCCATA
GGCATGGAGT TGACGGCTCC CACTCAACAA GACCACAAAA TCTTGATTGA GCAAATTGAG
GATGCCCAGA TGAAAAGAGA AATTCTCTTG AAAATGGATG CGATAGAGGA TATCCAGACT
AATTCTGATA ATGGCAAACA GGAACGTATC AGACAGTGGG CGCAAAAATT AGGGAAGCAT
CCAAGAACCA TTACCCGTAT GTTGTCTAAG GCAGACATTG AAGGATTAGC AGCAATAATC
AAAACCAAAC GCGCGGATGC TGGTAAACGT AGAGGGAAAA AGCAGTGGCA GCCCAGCGTC
GAGTATTGGG TGAATTTTAT CGAAAAAACT TATAGAGATG GCAATAAAAA TAGCCGTCGC
ATGAATCGCA ACCAAGTTTA CAACCAGGTG AAGGGACACG CCGAATTGGA ATTAGGGTTG
AAAGAGAGTG AATACCCAAG CCATGTGTTT GTTTATCAAG TGCTAGCTCC CTTAGTCGAA
AAGAAAAAAG TCCGACATCC AGGGCAAGGT TCTCGGATTG TAATTAAGAC AACGGCAGGA
GAGTTAGTAG TTGAGCGTAG CAATCAAGTC TGGCAAATAG ACCATACTCG TTTAGACACT
TTATTAGTAG ATGAGAATTT AGAACTAGCT GGCAGTCTCT ACATTACTGT GGTCATCGAT
AGCTATTCCG GGTGTGCAAT GGGGTTCTAT CTGGGCTTTG AGGCAGCAGG GTCTCATGAA
GTAGCACTAG CCCTGCGTCA TGCGATTTTA GCCAAACAGT ATCCGCCTGA TTACCAAATA
CAACATGAGT GGATGCTTGC GGGACTGCCT GAATATATTG TCACAGACCG AGCCAAGGAA
TTTAGATCGG GGCATTTGCG ACGAATTGCA ATGGATTTGA ATATTCAACT ACGGTTACGT
GCTTATCCAC AGCAAGGAGG TCTGATTGAA AGCCTGTTTG ATAAAGCAAA TAAAGAAGTT
TTGTCAATGC TACCTGGCTA TAAAGGCTCC AATGTCCAAA AAAGACCATT AGATGCCGAA
AAATATGCCT GTATAACCTA CGAAGAATTT GAGAAAATAT TAACTCGATA TTTTGTTGAC
CACTACAATC AACATCTCTA TCCTAGAGTC AAAAATCAGA CACGAATTCA ACGGTGGTGG
GCAGGGTTAA TTGGCAAACA ACCTAAGCTA TTAGAAGAAC GCGAGTTAGA TATATGCTTA
ATGAAGACAG TACCGCGCTG TGTGCAAGCG TATGGCTGTG TACAGTTTGA GTGTCTAATC
TATAGTGCCA CTTGGCTACA AAAGTTTGAG GGACAGCAAG TTACTCTCAG ATACAATCCC
AGCAATATTG TTACTCTCCT GGTTTATAGC GTGGAGAAGA ACAATCAAGC GTCTGTTTTT
CTAGGTACGG TAAAAGCCAG AGATTTAGAT GAAGAACGTC TGTCCTTGAA GGAGTGGAAG
GCAATAAAGC AAAAGGTTCG TTCTTGTGGT AAAACTATTG ACCAGTCGTC AATTTTATCA
GAGCGACTAG CTTTAAATGA GTTTGCTCAA GAGAAAATTA GGACTCTTAA ACAACGACGA
GCATCAGAAC AAAAACGCAT TAACCGCAAA TCGGTTCAAA GCAAAGTCAT TGAATTATTT
CCTGAAGAAA ACGAGACTAC TGTTGTTTTA GAAAAGGAAA CAGACGCTCC TGAGCTATCT
CAACAATCAG CAATAAATTT GGTCAGTGAG CCTAAACAAC AATGCGCTAA ATCGAGTCAA
AGCATTGCTT ATGACTGGAA CCAAATTATT GAAGAGAATT GGTAG
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| Protein sequence | MLEKKVSQGE QNNLFEVTPI GMELTAPTQQ DHKILIEQIE DAQMKREILL KMDAIEDIQT
NSDNGKQERI RQWAQKLGKH PRTITRMLSK ADIEGLAAII KTKRADAGKR RGKKQWQPSV
EYWVNFIEKT YRDGNKNSRR MNRNQVYNQV KGHAELELGL KESEYPSHVF VYQVLAPLVE
KKKVRHPGQG SRIVIKTTAG ELVVERSNQV WQIDHTRLDT LLVDENLELA GSLYITVVID
SYSGCAMGFY LGFEAAGSHE VALALRHAIL AKQYPPDYQI QHEWMLAGLP EYIVTDRAKE
FRSGHLRRIA MDLNIQLRLR AYPQQGGLIE SLFDKANKEV LSMLPGYKGS NVQKRPLDAE
KYACITYEEF EKILTRYFVD HYNQHLYPRV KNQTRIQRWW AGLIGKQPKL LEERELDICL
MKTVPRCVQA YGCVQFECLI YSATWLQKFE GQQVTLRYNP SNIVTLLVYS VEKNNQASVF
LGTVKARDLD EERLSLKEWK AIKQKVRSCG KTIDQSSILS ERLALNEFAQ EKIRTLKQRR
ASEQKRINRK SVQSKVIELF PEENETTVVL EKETDAPELS QQSAINLVSE PKQQCAKSSQ
SIAYDWNQII EENW
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