Gene Ava_B0113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0113 
Symbol 
ID3677656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand
Start bp129424 
End bp130554 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content37% 
IMG OID637714820 
ProductParB family protein 
Protein accessionYP_320014 
Protein GI75812395 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGAG GTTTGCCCCA AATAGGTGAA AAATTTAAAG GTGCAGTTCA GAAAACTGAC 
CAAGAAAAAA AAATTGCTCA ACTGCAAGCA GAAATAGAAC AACTGAGAAT TAAGCAATCC
CCAGAACTGG AAGCTGAGTT ACAAATACTA CGGGAAAAAC TCAAAAGTAG TGCGGGAGAA
GTAGAGATTG AGCTTGAATT AATAGATCCT AATCCTCATC AACCCAGGCA AACGATAACG
TTAGAATCCA TTCAAGCTAA AGCTAGACTA CTGAAAAAAC ATGGGCAGAT TACCCCAATA
ATTCTTGTAG CTCAAGAAGA TGGTCGTTAT ATCCTGTTGG ACGGTCAACT GCGTACTGAG
GGAGCAAAGC TACTAGGATG GAAATCCATT CGGGCTGTTG TAGTACCTAT GCCCAAGGAT
TTGACACAAT CATCATTAAT TACATTTCTA GGATTTGAAG ACTTAAACCC ATTAGATAAG
GCGGAAGCTG TAATTCAAGA GGTGACTAAA GCAACTGCAT TAAGTTCTGA GGAAATTACT
ACAGCACTGG CAACTGTACT CAAACGTATT GAACGCGACA GTAACATCAA AGAATTGGCA
AAATTGACAA GTTTAGATGT AGATGAGCAA AAACAAGGAT TAGAATCACT GAGGATTATA
GGTGAAGAAC AAAATTTGTT TTTATCATTG TTGGAGTTGG GTTTAAATCC GGCTTCAGTC
AAATCTAATT TAATACCTAT GCTGTCCTTA CCTGATGATT TAAAAAATGC GATTCGTCAG
AAAGGGCTGA AAGGGGCGCA CGCGTTGGCA CTATCAACAT TATCAGCAAA AGCTTTAGAT
ACATCTGAAG AAAAGGCTTT AAAAGAGCGA ACTATAATTA CTCAAAAAGT TTTAGCAGAA
AATCTTACAG TACCTGAAAC ACGCGAACTT ATTAAAAAAG TTAAGGCTGA ATATATAACA
AAAACTGAAT CTGAATCAAA AGAGGTGAAA TCTATTATTC AAAAAATCAG CAGTATTTCT
AAAGAGTCAT TAGTAAATGT AAGTAGTAAG CAACTTGAGG AGCTTAAAAT ACTTTTACAA
CAAAAACTGG TTGAGATAGA AGAATTGAGT CGCCAACAGA AAAATATATA G
 
Protein sequence
MARGLPQIGE KFKGAVQKTD QEKKIAQLQA EIEQLRIKQS PELEAELQIL REKLKSSAGE 
VEIELELIDP NPHQPRQTIT LESIQAKARL LKKHGQITPI ILVAQEDGRY ILLDGQLRTE
GAKLLGWKSI RAVVVPMPKD LTQSSLITFL GFEDLNPLDK AEAVIQEVTK ATALSSEEIT
TALATVLKRI ERDSNIKELA KLTSLDVDEQ KQGLESLRII GEEQNLFLSL LELGLNPASV
KSNLIPMLSL PDDLKNAIRQ KGLKGAHALA LSTLSAKALD TSEEKALKER TIITQKVLAE
NLTVPETREL IKKVKAEYIT KTESESKEVK SIIQKISSIS KESLVNVSSK QLEELKILLQ
QKLVEIEELS RQQKNI