Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_B0106 |
Symbol | |
ID | 3677649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007410 |
Strand | - |
Start bp | 115894 |
End bp | 118734 |
Gene Length | 2841 bp |
Protein Length | 946 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637714813 |
Product | ATPase, E1-E2 type |
Protein accession | YP_320007 |
Protein GI | 75812388 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0474] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01517] plasma-membrane calcium-translocating P-type ATPase [TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGCTA ATTTATCGCA CCCTCAAATT CCTCAACCCT TTGAGAGTAG ATCGTGGCAT ACTATCGAGG CTCAAAAAAC TCTTTGGCTG CTCAAGAGCG ATCGCACGCA TGGTTTAACC CAGGAACAGA TTGACGAGAA TTTACAGCAC TATGGTACAA ACGAACTGGT CGAAATAAGT GGGCGATCGC CCTGGGAAAT TTTCTGGGAT CAGTTTAAAA ACATCATGTT ACTAATGCTG ATCGCCGTGG CCATTATTTC GATGCTTCTG GATGTGCGTG AATCTTTGGT AAAGGGACAG TTCATTTTTC CCAAGGATGC GGTAGCAATC TTTGCGGTGG TATTGCTGAA TGGTTTACTG GGCTACCTCC AGGAGAGTGG AGCCGAAAAA GCATTGGCAG CACTGAAAAA CATGGCATCG TCCAAAGTGC GGCTGATCCG CGAAGGTAAA GTAGTGGAGG CGGAATCTAA AGAACTGGTG CCTGGGGACA TTATGCTGCT GGAAGCTGGG GTTAAGGTGG CAGCAGATGG GCGCATCCTA GAAGCAGCAA ACTTGCAGGT GCGAGAAGCA GCACTCACCG GAGAGGCACA CGCGGTTGAA AAACAAGCCA ATGCCATCCT ACAAGAAGAT GCGCCTCTGG GCGATCGCAT CAATTTAGTG TTCTCTGGAA CAGAGGTGGT GCAGGGACGG GCAACAGTGG TAGTCACCAG CACTGGAATG CAAACCGAAT TGGGCAAGAT TGCAACCGCG CTGCAATCCG TCGAGACAGA GCCAACACCT TTGCAAAAAC GCATGGCCCA ACTGGGCAAT ACGTTGGTTA CAGGATCGTT GATTATAGTA GCGATCGTGA TTTTAGGGGG GACATTGTTC AACCCCTCAC TGTTTGAGGA ACTAGTCAAA GTCTCCCTCA GTATGGCGGT TGCGGTGGTA CCAGAAGGCT TACCCGCCGT GATTACCGTT ACCCTGGCAT TGGGTACGCA ACGCATGGTG AAGCGGAACG CCCTGATCCG AAAACTGCCT GCGGTGGAAA CCCTCGGTTC TGTGACGACC ATCTGCTCGG ATAAAACCGG AACTCTAACC CAGAATAAGA TGGTGGTGCA GGCAGTACAT ACCGCTAGTT ACGCCATTCG TGTAACAGGG GAGGGATACA GCTCTGAAGG CGCGTTTTAT CAGCAGGCCA ATACCGGAGT AGGACAAGAA ATTGTAGTGG AGGCAGTGCC AGAATTGCGA TCGCTACTTC TGGCGTGCGT ACTTTGTAAT GATGCCGTAT TGCATAAGGA AAATGGCGAC TGGGCAATCT TAGGCGATCC CACCGAAGGA GCGTTACTAG CAGTTGCCGG CAAAGGAGGT TTTCGCAAAG ACCAGGAGGA GCAAACCTTC TCCCGTATTG CTGAGTTTCC CTTTTCATCC GAACGCAAGC GGATGAGCGT TGTCGTGCAG GATACGTCCA ACCAACTGGG AGAGAGCGTG TTTATCATGT TTACCAAAGG CTCGCCCGAA CTAGTTTTGC AACTCTGCAC CCACATTCAG CAGAGCGATG GGTCTCAAAT GATCACAACA CAACAACAGC AACAGATTTT AGAACAGAAT AATCAGCTTG CCAGCCAAGG GTTACGGGTC TTAGGTTTTG CTAGGAAGAA CGTGACAAAA TTATCAGACC GCGATTTTGA AGATACGGCT GAAACTCACT TGACTTGGTT GGGATTGGCG GGAATGCTGG ATGCTCCCCG TCCGGAAGTG CGGGATGCGG TGGCAAAATG CCGTACCGCA GGCATTCGTA CGGTGATGAT TACAGGCGAC CACCAGTTAA CCGCACAGGC GATCGCCCAA GACTTAGGCA TTGCAAAAGT AGGCGATCGC TCTCTGACTG GGCAGGAACT CCAAAAGCTC ACCCAGCCAG AACTGGAAGT ACAAGTGCAA CAAGTTAGCG TCTATGCCCG CGTTACACCA GAGCATAAGT TACGAATAGT CCAAGCTCTC CAGTCCCAAG GACAAATTGT TGCCATGACT GGGGATGGAG TTAACGATGC TCCAGCCTTG AAACAAGCAG ATATCGGTGT GGCAATGGGC ATTACAGGCA CGGATGTCAG TAAGGAAGCC AGCGACATGG TGCTACTGGA TGACAACTTT GCCACAATTG TCTCGGCAGT TGAAGAAGGA AGAGTTGTTT ACATCAACAT TCGTCGCTTT ATTCGCTACA TCCTCGGCAG CAACATCGGT GAGGTATTGA CCATTGCGGC TGCGCCATTG CTGGGGTTGG GTGGCGTACC GTTGTCTCCC CTGCAAATTC TCTGGATGAA CTTGGTAACT GATGGACTTC CGGCTTTAGC ACTGGCAGTA GAACCCGGTA GACCAATCGT CATGCAACAA CCTCCAAAAG ATCCAAAAGA GAGCATTTTT GCCAGAGGTT TAGGGTCTTA CATGGCGCGG ATTGGCATTA TTTTGGCTGT AATAACTATC TTGATGATGG TCTGGGCATA CGATTACACT GCCCAGTTAC AAAGCGAATT GTTAGATCGC GATCGCTGGC AGACTATGGT GTTTACTACG CTTTGTTTAG CACAAATGGG ACACGCACTA GCAATCCGTT CCAACACGCG ATTGATGTTA GAGGTAAATC CCTTCTCCAA TCCTTACGTT GTTCTATCTG TTACCGTCAC CAGTATCCTG CAACTGATGC TTATTTATGT TGAACCACTC CGTTCCTTCT TCAATACTCA TTACCTGAGT GGATTAGAGC TATTAGTTTG TATTGGATTT AGTTCTCTAG TATTTGTCTG GATTGAAGCA GAAAAGCTAT TTATCCGATG GTATACCTTT CGTAAATACT CCAAAATATG A
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Protein sequence | MSANLSHPQI PQPFESRSWH TIEAQKTLWL LKSDRTHGLT QEQIDENLQH YGTNELVEIS GRSPWEIFWD QFKNIMLLML IAVAIISMLL DVRESLVKGQ FIFPKDAVAI FAVVLLNGLL GYLQESGAEK ALAALKNMAS SKVRLIREGK VVEAESKELV PGDIMLLEAG VKVAADGRIL EAANLQVREA ALTGEAHAVE KQANAILQED APLGDRINLV FSGTEVVQGR ATVVVTSTGM QTELGKIATA LQSVETEPTP LQKRMAQLGN TLVTGSLIIV AIVILGGTLF NPSLFEELVK VSLSMAVAVV PEGLPAVITV TLALGTQRMV KRNALIRKLP AVETLGSVTT ICSDKTGTLT QNKMVVQAVH TASYAIRVTG EGYSSEGAFY QQANTGVGQE IVVEAVPELR SLLLACVLCN DAVLHKENGD WAILGDPTEG ALLAVAGKGG FRKDQEEQTF SRIAEFPFSS ERKRMSVVVQ DTSNQLGESV FIMFTKGSPE LVLQLCTHIQ QSDGSQMITT QQQQQILEQN NQLASQGLRV LGFARKNVTK LSDRDFEDTA ETHLTWLGLA GMLDAPRPEV RDAVAKCRTA GIRTVMITGD HQLTAQAIAQ DLGIAKVGDR SLTGQELQKL TQPELEVQVQ QVSVYARVTP EHKLRIVQAL QSQGQIVAMT GDGVNDAPAL KQADIGVAMG ITGTDVSKEA SDMVLLDDNF ATIVSAVEEG RVVYINIRRF IRYILGSNIG EVLTIAAAPL LGLGGVPLSP LQILWMNLVT DGLPALALAV EPGRPIVMQQ PPKDPKESIF ARGLGSYMAR IGIILAVITI LMMVWAYDYT AQLQSELLDR DRWQTMVFTT LCLAQMGHAL AIRSNTRLML EVNPFSNPYV VLSVTVTSIL QLMLIYVEPL RSFFNTHYLS GLELLVCIGF SSLVFVWIEA EKLFIRWYTF RKYSKI
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