Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_B0095 |
Symbol | |
ID | 3677677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007410 |
Strand | - |
Start bp | 105243 |
End bp | 106271 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637714802 |
Product | WD-40 repeat-containing protein |
Protein accession | YP_319996 |
Protein GI | 75812377 |
COG category | [R] General function prediction only |
COG ID | [COG2319] FOG: WD40 repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000200238 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCTCA ACCGTATTTT GTGGAATTAC CTAATAGCCC CAACAGTAAT CACTATTGCT GTTTGCGGTT GCACTACACA GACTCCCAAC ACTCAGGATT TAATTGCTCA GTCGCCAAAA GATAGCCAAT TAGTCCGTAC TTTATCAGCA CGGTCTGATT CAGGTTATTC GGTTGCGTAT TCTCCAAGCT CTGTGGGAAC AATTCTTGCT AGTGCTGGTG CTAAAAGCAT TAAGCTTTGG AATCCTAACA CGGGTAAACT ATTGCGTACT TTATCAGGAC AAGCTTTTAC TGTCGGCTTT AGCCCAGATG GTCAGATTCT CGCTAGTGGT TCTCAGGACG GCAGCCTGAA TTTGTGGGAT GTTCAAACAG GGAAACTCAT CCGTACACTC CAACACTCAG AACCAGTGCT TGGTGTAGTC TTTAGTCCAG ATGGACAAAC TCTGGTTAGT AATCTTGATC TCGGATCTAT CATCAGGCTG TGGAATTGGC GTACTGGAGA AATCATCCGC ATAAAGGATG ACCCTGACGC TTATCAAAAA GGATTTGAGA ACTTCAAAAC TCAACCAGCC ACTTTTAGCC TGGATGGTCA GACCTTATTT GCTACAAGTG GTTCTGGTTC TCTGCTCCAG TCTTGGAATC TGAAAACTAG TAAACGAACA GGTAGTTTCG AGGCGAAATC ATCAATTAAT GCTGTCGCTA TCAGCCCAGA TGGAAACACC CTAGCTACTG GCATTCGGGA TAATGCAATT AAGCTGTGGA ATATTAATGA TGGTAAACTC ATTCACACTT TAACTGGTCA TAAAGGTCAA GTCAGAACTG TTGCCTTTAG CCCAGATAGA ACATTACTGG CTAGTGGTAG CTCTGATGGC ACTGTCAAAT TGTGGAATGC TACTACTGGT AAAGAAATCA ACACTTTTAC AGCACACAAA GAACAAGTTT GGTCTGTGGC TTTCAATCCT GATGGCAAAA CACTTGCTAG TACTGGACAA GATGGCAGTG TTAAGATTTG GGGTGTATCC CCACAATAA
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Protein sequence | MTLNRILWNY LIAPTVITIA VCGCTTQTPN TQDLIAQSPK DSQLVRTLSA RSDSGYSVAY SPSSVGTILA SAGAKSIKLW NPNTGKLLRT LSGQAFTVGF SPDGQILASG SQDGSLNLWD VQTGKLIRTL QHSEPVLGVV FSPDGQTLVS NLDLGSIIRL WNWRTGEIIR IKDDPDAYQK GFENFKTQPA TFSLDGQTLF ATSGSGSLLQ SWNLKTSKRT GSFEAKSSIN AVAISPDGNT LATGIRDNAI KLWNINDGKL IHTLTGHKGQ VRTVAFSPDR TLLASGSSDG TVKLWNATTG KEINTFTAHK EQVWSVAFNP DGKTLASTGQ DGSVKIWGVS PQ
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