Gene Ava_B0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0087 
Symbol 
ID3677669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand
Start bp94830 
End bp96476 
Gene Length1647 bp 
Protein Length548 aa 
Translation table11 
GC content48% 
IMG OID637714794 
Producthypothetical protein 
Protein accessionYP_319988 
Protein GI75812369 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.372838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGACAC TAGACCACGA ACAAATATCA ACCCCTGACT ACAGCCTTCT CAACAGCAGC 
ATCAAAGAAA CCTTCACCAC CATAGACCGC TTTGAGTGGC AAGCTGTTGA GGAAATATTG
CAGATGCGAG ATCAACAGCT TCATCGTGAA GCTGGCTATA AAAGTTTTGA GGAATACTGC
CAAGCTGAGT TATCAGCCTG GGGTGGCTAC AGAAGAATCA CCCAACTGTT GGGAGCCAAA
AAAGTAATTG ATGCAGTTGG CGAATTAGGC GAACACATCA AAAATGAACG TCAGGCTCGT
CCTTTACTAC GGTTAGTCAA GGAACCAGAC AAGCTCAAAG AAGCCGTAGC GATCGCTCTG
CAAGAAAACC CGAACCCCAG TGAATCAGAC TTTGCGGCTG CGGCGAGAAA AGTAGTTCCT
CAACTGCCAC GTAAAAAAGC ATCATCTCAG GAACCAATGG TTCCTAAAAT TCAAGAACCA
ATGGTTCCTG AATCTGCAAG AGTCACCGTT ACATCACCAA CTCACCACAG ACATGGAGAA
TCAGGAACAA TCGAAGCAGG CCCGCCCAAC CACTGGCAGC AGATTGTAAC TTTTGCTGAC
GGTAGTAAGG AACTGGTAAA TAACGCCGAT TTGGATGCAC CCAGCGTTTC TTTCCCCAGT
GAGAGAACAC TTCCCCCGGA ATACTCTGAG GCAATCGCAC AACTAAAACA GCAGCATCAA
CAGGAATTAC AACGGCTAGA ACAGGAGTTA AGGATTGGGT TACTCTCCGA AGCTACAACC
AAGGCAGAAG AGCAAGTACA AGAACAACTG ACCGCTTTAC AAAACCTGTT TCAGCAGCAG
AAGCAACAGA ACATCCAGCT ACAGCAACGA TTGGACGAGA TGGAAGCATT GAGACAGTTG
GAATACGATA ACCAACAACT CAAACAGCGT ATTCAGGAAT TGGAGAATGC TGTACAAGAA
AATCCCACCC AGCAGTGGGG AAATACTCTG ACCAAGCAGG CGGCGAAGGC TTTAAACAAA
GGGGTTAAGC AAGCTTTAAA CAAAACCATT GACCTGCGAT CGCTGGCGAA GGAACCACCC
AAGGAAAATG CCCAAGAGTG CTTACGCCTG ATGGGTATTG CTTTGGGCAA TCTCGCCAGT
GCCATGAATC ATACCCAAGC CCTACAAGCT GCGGCGTTAA TTTTGGGTAG TGAACCGAAT
CCACAGGCGA TCGCCTATCG TGCGGAACAA TTACAACTGT TACCCCAAGC GGTGAGTGAT
ATTCGGGCGG TGCTTGCCAA GCCTGGGTGT AGCTGGTGGG ACTATTTAGA AGTGGCGCAG
GAATACGAAG TTATCAAAGC CGACTACTGG GCAGAGTTGA CAACAGAAGA GACGGAGTTA
ATCACCGCTT TGGAGAAAAC CGAATCCTCC AAGATTACGG AATCATTGGT TTCTCACGAA
GCCCTTACCG AGTCTGGTTC TTTTGATGAC GAAGTGATTG GGCTGGGTTC TATTGTTGCC
CATGCTGACA TTTACTGCGC TTTATATAAC GCCAAGGGTG AAGTCATCGA AGACATGGGG
GATGAGGTCT GGGTGGCTTG GGAGCATTGG CGCGATAGAG GCAAGAAGAC AGACCGATAT
TTCAAAGACG AGTTGCGCCT GTTGTAG
 
Protein sequence
MLTLDHEQIS TPDYSLLNSS IKETFTTIDR FEWQAVEEIL QMRDQQLHRE AGYKSFEEYC 
QAELSAWGGY RRITQLLGAK KVIDAVGELG EHIKNERQAR PLLRLVKEPD KLKEAVAIAL
QENPNPSESD FAAAARKVVP QLPRKKASSQ EPMVPKIQEP MVPESARVTV TSPTHHRHGE
SGTIEAGPPN HWQQIVTFAD GSKELVNNAD LDAPSVSFPS ERTLPPEYSE AIAQLKQQHQ
QELQRLEQEL RIGLLSEATT KAEEQVQEQL TALQNLFQQQ KQQNIQLQQR LDEMEALRQL
EYDNQQLKQR IQELENAVQE NPTQQWGNTL TKQAAKALNK GVKQALNKTI DLRSLAKEPP
KENAQECLRL MGIALGNLAS AMNHTQALQA AALILGSEPN PQAIAYRAEQ LQLLPQAVSD
IRAVLAKPGC SWWDYLEVAQ EYEVIKADYW AELTTEETEL ITALEKTESS KITESLVSHE
ALTESGSFDD EVIGLGSIVA HADIYCALYN AKGEVIEDMG DEVWVAWEHW RDRGKKTDRY
FKDELRLL