Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_B0077 |
Symbol | |
ID | 3677883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007410 |
Strand | - |
Start bp | 88095 |
End bp | 89756 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637714784 |
Product | IS891/IS1136/IS1341 transposase |
Protein accession | YP_319978 |
Protein GI | 75812359 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.647705 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATTGA TTCCGTCCTA CCAACTCAAA GAACAGACAA AGCAATCATC CTCTAGGGCA GGGTTTCTCG CCACACTCAA CAGTCTGACC TGGAAAGACA AATACAGTTT CTTGTCGCTC GTTACCCCAG TAGTGAAGTC ATCCAAGAAG TCGGAAGCGG ACTCAACTTC CGAAGAAAAA AGTTACTTGC CATACTGGAA CGAGTTCTCG CAGGCGATGT CAGAATGGTT GTGGTCTGCC ATAAAGACAG ATTATGCAGA TTTGGATTTA AACTCATCCA ATGGTTGTGC GAAAAATGCA ATTGTGAACT CGTGGTTCTC AACCAAGCTC AGTTATCTCC AGAGCGAGAA ATGGTTGAGG ATATTCTGGC AATCATCCAT GTCTTCAGTT GCCGACTGTA CGGACTCAGA AAATACAAAC AGGAAATCCG TAAAGGTTTG CACGCAATAC CGGATGATAT TAACACTAGA ACAAGAGCAA TTGTTAATGA AGTGGGTAAG GCTGAATCGT AAAACCTACA ACATGGCAAT AGCCTACCTC AATCAAAAGC AGGGATTTGA CAGAACAGGG ATTGGAGGCA CAGGAAAACA AGCATTCAAG ACCTTTTTTA AAGCCCACAT CCGACCAGAC TGGTTAAAAA ATGAGCTACC CGCAGCGATT TTGGATCAAG CTGTTATGGA GGCATACTCA GCGTGGAGTA CGACACAGCG CCATCCCAAA ACTATTAGTA AGGGTAAAGA CAAAAAGCCA CATCCACAAG CTGGGTTGAA GATTGCCAAG TTTCGCTCTA TTCGTGACTC ATCGCAGACA TTACAGTTTA AGATTGCATC TGATTTAAAC AAAGGTCGAT TGCTACCGCA GTACTGGGGT GAGCTACCAG CGTTTGAGTG TGTTGATAAT GGTGTCAGGT TTTGCCCAAT CTCTAATCCT TATACTCCAG AAGTCACATA TAAACATAGT CGATTCTACA TTTCATTACC AGAGGATGTA GAAGTCGTTG ACAATAACAA AGATGCGTTC ATTGCTTTTG ACCCTGGTGT GCGGACATTC CTCACAGGTT TTGATGGTCA GAAGATGATT GAGTTTGGCA ATGGTGACAT TCATCGAATT GTCAGATTAT GTCAATGGTT AGATAAACTC CGTTCATTCA GGGATTTATC TAAAGGTTTC AAGAACCGTC ATCTGCGCTA TCGGCTATCC CAAAAGATGA AGCGGGTAAC AAGACGGATT CGCAATCTTG TGGATGAAAT GCACCGCCAA GTTGCATCTT GGGTGGCCAA GAACTACAGG GTGATTGCCT TACCAACTTA CGAAACATCT CAAATGGTTT GTCGCGCCGT GCGTAAAATC AAAAGCAAAA CGGCGCGGTC AATGTTGAGC TTTGCTCCAT ATCGCTTCAG TCAAGTGTTA GAGCATCAAT GTGCCAGAAA TGGCTCGGTT TTGATCCGGC ACACTGAAGA ATTCACCAGT AAGACTTGTT CTCGTTGTGG GCATATCCAC TATTCATTAG GCGGACAAAA AATCTTTAAA TGTTCCAATT GCGGCAATCA TCTACCGCGA GATTGGAATG GAGCCTTGGG GAATTTCCTC AAGGCGTTGT GGGATACCAC CTTGCTGAAC TCAGCAAGCT TTGATTGCGT TCAGATGACA GTCTTTGTCT AG
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Protein sequence | MTLIPSYQLK EQTKQSSSRA GFLATLNSLT WKDKYSFLSL VTPVVKSSKK SEADSTSEEK SYLPYWNEFS QAMSEWLWSA IKTDYADLDL NSSNGCAKNA IVNSWFSTKL SYLQSEKWLR IFWQSSMSSV ADCTDSENTN RKSVKVCTQY RMILTLEQEQ LLMKWVRLNR KTYNMAIAYL NQKQGFDRTG IGGTGKQAFK TFFKAHIRPD WLKNELPAAI LDQAVMEAYS AWSTTQRHPK TISKGKDKKP HPQAGLKIAK FRSIRDSSQT LQFKIASDLN KGRLLPQYWG ELPAFECVDN GVRFCPISNP YTPEVTYKHS RFYISLPEDV EVVDNNKDAF IAFDPGVRTF LTGFDGQKMI EFGNGDIHRI VRLCQWLDKL RSFRDLSKGF KNRHLRYRLS QKMKRVTRRI RNLVDEMHRQ VASWVAKNYR VIALPTYETS QMVCRAVRKI KSKTARSMLS FAPYRFSQVL EHQCARNGSV LIRHTEEFTS KTCSRCGHIH YSLGGQKIFK CSNCGNHLPR DWNGALGNFL KALWDTTLLN SASFDCVQMT VFV
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