Gene Ava_B0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0060 
Symbol 
ID3677925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand
Start bp72343 
End bp72870 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content34% 
IMG OID637714769 
Producthypothetical protein 
Protein accessionYP_319963 
Protein GI75812344 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGTA ATTTAGAACA AGTAAGTTTA GAGTCTAAAA GACTGATTCT ACAAGTGATT 
TCCTGGGAAT ATACAGAAAA TGTATTTCGA GAATTTACCA GGGAAATTAC CACCTTTATG
TATCCAAAGC CAGCATCTAG TCTTAGTGAA ACTGAAAAGA TAATCAGAGA TATGATTATA
CAACGAGAAA ATCACACTGA CCTAGTATTA GTAATTCTTA AGAAAGATAA TTTAGAATTT
TTAGGAATTT GCGAGGTTGG TGCTATAGAT ACTCATACAC CGGAGTTAGG AATTTGGCTT
AAGAAATCCG CTCATAGTCA TGGTTTTGGT AGAGAGGCAA TTGATATACT AAAAAACTGG
GTAGATAAAA ATTTGGAATA CAATTATCTT TCCTACTCTG TTGATAAAAG AAATATCCCC
AGTCGGAAAA TAGCAGAAAG TATTGGCGGC AAAGTAGTTC GGGAGTTTCA ACAGATTAAC
AAGAGCGGTA ATCTTCTTGA TGAGGTTGAA TACAGGATTT ATAAATAA
 
Protein sequence
MASNLEQVSL ESKRLILQVI SWEYTENVFR EFTREITTFM YPKPASSLSE TEKIIRDMII 
QRENHTDLVL VILKKDNLEF LGICEVGAID THTPELGIWL KKSAHSHGFG REAIDILKNW
VDKNLEYNYL SYSVDKRNIP SRKIAESIGG KVVREFQQIN KSGNLLDEVE YRIYK