Gene Ava_B0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0048 
Symbol 
ID3677913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand
Start bp59065 
End bp60807 
Gene Length1743 bp 
Protein Length580 aa 
Translation table11 
GC content37% 
IMG OID637714757 
Producthypothetical protein 
Protein accessionYP_319951 
Protein GI75812332 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCTCG AAATTAGGCA TTTTGATACT AGGCTAAATC AGTGGATTCA TACTGACGGA 
GATAAAAACA ATCCTGGTTC AATTTTAACT GAAAAATTAG ATAACACTCT ACTAGAATTT
TACTTTCCAG GTAAAGAATT TTCTTTTGGA CATATAGATG AGTATTGTAA AGCAGAAGAT
TTAAGAAATC ATCCAGATGG GAATATTCTG TTACTGTCTT CCAAAACAAG GCTATTGTAT
GGTTCTCCAG AATGTTTACC TGAAATTGAA AAACTTTGTC CAGATAGAAA AGACAGAGGT
GCTTATGGTT CCATTTTTCT AGGTGCTTGT AAAAATTCAA TCCATGAAGA ATTAAATATC
TTGGTTGTTG ATGATTCTAC TGGAGAAAAC GGAAAAATAT TATCAAATGA TTTAGCGTAC
AAGATGGTAG GTGATTGCTA TGGACAAATC ACAACCGAAC TTTATGACAG ATTGACTAAA
CGAGAAGAAC AGTCGGACAA AAGTTATCGC GTTATTCAAC ATCGGTTTGG ATGGACTGAA
CGTGATGGAG AAGATAACAA ATATAGATTC GGCAAGGGAA CATTAAGACC GTCTAAATTA
GATAAGCTAA GATATGCAGA TTCTAGCAAT AAACCCAAAA TCGATATAAT TCTCCCCCTA
TCCAGCTTCA AAGGAACAGA CAAGGATTGT CCAGGCGGAT CTAGCAAGCC ACAAATTAAA
CCAGGACTCT ATAGACAGAA AATCTGGTTA GGAGAAAAGT CACAATCTCA ACAAGGTAAA
ACTGCCATAT CTCAACTTTT AGCATCGTTT CCTCAAGGTA TTAAGGACTT CGCTGAAGAA
TTAGAGATGC AGGCTCAAAA ATTAGCCCAG ATGCAGTCCG ACCCCAGGAA AGTAGCTCAA
CTGTATTGTG AAAAGTATGA AAAACGCAAG GCTTTTACTG AAAAGCAAAA AGTCTTGCTA
CAGCAGCAAA TTACTGAACA GGTTGCTGAT GGAAAAGTCG CTAAAAAATT AGAGTTTTTA
ACTAAAAATG AAGATTCAGA AGAATTTGAA ATAAGTGATG AGCTTGACGA ATCTCCAAAA
GAAGATTTGT TAATGTACAG AATTATTAAA GCTGACTTAA TTGGTGGACA TAATCAACTT
ATAGAAACAG AAAAAGTAAG AAAAGAACTA AGTCGATTTG TCCAAAATGA GTGGTGCGAT
ATTGCAATTG GCAGAGCTAT CACATTTGAC CGAGCGATGA TTATTCCGTC TAAAGAATTG
AAAAACGGAG AAATTTGTGT ACCTTGGTTA AATGAAGGGG AAAAAGTTCT AAACTTCCGT
TCACCATTCC TAAACTCGAA TGGCTTGTGT GTCTCTGTCA ATAAGCTGGT GGATGATTAT
TTAACACCTG ATGGTGAACC ACTAGAGGGT ATTATCGTAG TCAACGATGA AGACCATAAA
CGCATATTAG CAAGACTTGA AGCTGACGAA ATAGCCCCAT TAGAAACCGA ATCAGAACGC
CAGGGTAGAG ATTTTGACGG TGACTGTATC GGAGTAACAC TAGCAAGTAA TTACCCCAAC
TTTACGGCAG AAGCAGAATA TAGAAACCAG AGAGAAAACG CCTATGCTCC TACAGTAAAA
CTGAAGAAAC AATCATTTTA TTTACCAGAT GGGATACAAC CGCCATTTGA AGAAATCGCC
ATACACATGA GCGATAGTAT TAGCGTGGGC ATCATTAATA ATTCAGACAA AGCTGATGTT
TGA
 
Protein sequence
MTLEIRHFDT RLNQWIHTDG DKNNPGSILT EKLDNTLLEF YFPGKEFSFG HIDEYCKAED 
LRNHPDGNIL LLSSKTRLLY GSPECLPEIE KLCPDRKDRG AYGSIFLGAC KNSIHEELNI
LVVDDSTGEN GKILSNDLAY KMVGDCYGQI TTELYDRLTK REEQSDKSYR VIQHRFGWTE
RDGEDNKYRF GKGTLRPSKL DKLRYADSSN KPKIDIILPL SSFKGTDKDC PGGSSKPQIK
PGLYRQKIWL GEKSQSQQGK TAISQLLASF PQGIKDFAEE LEMQAQKLAQ MQSDPRKVAQ
LYCEKYEKRK AFTEKQKVLL QQQITEQVAD GKVAKKLEFL TKNEDSEEFE ISDELDESPK
EDLLMYRIIK ADLIGGHNQL IETEKVRKEL SRFVQNEWCD IAIGRAITFD RAMIIPSKEL
KNGEICVPWL NEGEKVLNFR SPFLNSNGLC VSVNKLVDDY LTPDGEPLEG IIVVNDEDHK
RILARLEADE IAPLETESER QGRDFDGDCI GVTLASNYPN FTAEAEYRNQ RENAYAPTVK
LKKQSFYLPD GIQPPFEEIA IHMSDSISVG IINNSDKADV