Gene Ava_B0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0039 
Symbol 
ID3677820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand
Start bp52059 
End bp53246 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content46% 
IMG OID637714748 
Productplasmid recombination enzyme 
Protein accessionYP_319942 
Protein GI75812323 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.647107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTATG CGATCGCCCG ATTAAAAAAA TTAAAGCGGG GGAATATATC AGGGAGTGCA 
TCTCACACTG CAAGAGAACG TGAAACTCCT AATGCAGATC CCACCCAAAA AAATATTAGG
TTCATTGGTA GCCTCGAAGA GGATGAACGA CTAGAGGATT TAGTTTTAGC CAAGATAGAG
GAGCATGAGC AGAAGCGAAA GATTCGCACT GATGCGGTCT ACTGCGTAGA GTTACTGTTG
AGTGCATCGC CTAGTTATTT CCGCCCAGAC TGCCCAACTA ATGCTGGGTA CTATGAAGGG
CAAAAGTTGG ATGACTGGGT AGAAGCGACT CACCAATGGT TGGCGGATGA ATATGGCGAT
CGCATTGTTA GAGCCGAGTT ACACCTGGAT GAAGCCACAC CCCACATTCA CGCTTACTTT
GTGCCGATTG ATGATGCCGG GCAATTGCGC TGTAATCATT TCTTCGATGG CAGGCAAAAA
ATTCATGAGT TTCAAGATTC TTACTACAAC ACGATGCGCC TAATTGGGTT GGAGCGTGGG
ATTAGGGGAA GTAAAGCCCA GCACCAGGAC ATCAAGGATT TTTACCGCAT AGTGGAGGAG
GGGCGAGACT TAGAAGTTGA TGAACTGAGT GCAGCGCAAT TAAAGGCTAA AGCGGCTGAC
CGAGACAGAG CGACTGCGCG TAAACAGGAA ATGGAAGCTA CGGCAAAGGC GTTAGCTTTT
GAGAATGAAC AATTAAGGCA ACGAATTGAG CAATCAGAGC AAGAAAATCA ACAATTACAA
AAACTAACCG AATGGTCAAC TGATTTAGCT TTGGATGATG TTGCTTGGGA GTTGGGGCTA
AACCGTGAGC ATGAGCAATG GCGGGGTCAT GGACATATCA TTACTATCGA TGGCTCTGGA
TTTACTGACA TTAGCAATGG TTCAGTATTG TCGGGTCATG GAGCGCTCAA TTTGGTGAAA
CACGTTAATA AATGTGACCA AGTTCAAGCT ATCACATGGT TGAGGGAGCG ATTTGGTGAG
GTTGGGGCGC AACGTGCAGC GATCGCCTCT ACTAGAAGAA TGACAAGTGA GATTATCCAG
ACCCAGCCAG TCCCTCAATT CACATTACCT ATTGAGGATA AAACTAGCTG GCAGCAAGTA
GAACATTACC TCAAACATAA ACGGGGCATC CCCTCTGATA CTGAATAG
 
Protein sequence
MSYAIARLKK LKRGNISGSA SHTARERETP NADPTQKNIR FIGSLEEDER LEDLVLAKIE 
EHEQKRKIRT DAVYCVELLL SASPSYFRPD CPTNAGYYEG QKLDDWVEAT HQWLADEYGD
RIVRAELHLD EATPHIHAYF VPIDDAGQLR CNHFFDGRQK IHEFQDSYYN TMRLIGLERG
IRGSKAQHQD IKDFYRIVEE GRDLEVDELS AAQLKAKAAD RDRATARKQE MEATAKALAF
ENEQLRQRIE QSEQENQQLQ KLTEWSTDLA LDDVAWELGL NREHEQWRGH GHIITIDGSG
FTDISNGSVL SGHGALNLVK HVNKCDQVQA ITWLRERFGE VGAQRAAIAS TRRMTSEIIQ
TQPVPQFTLP IEDKTSWQQV EHYLKHKRGI PSDTE