Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_B0039 |
Symbol | |
ID | 3677820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007410 |
Strand | - |
Start bp | 52059 |
End bp | 53246 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637714748 |
Product | plasmid recombination enzyme |
Protein accession | YP_319942 |
Protein GI | 75812323 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.647107 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTATG CGATCGCCCG ATTAAAAAAA TTAAAGCGGG GGAATATATC AGGGAGTGCA TCTCACACTG CAAGAGAACG TGAAACTCCT AATGCAGATC CCACCCAAAA AAATATTAGG TTCATTGGTA GCCTCGAAGA GGATGAACGA CTAGAGGATT TAGTTTTAGC CAAGATAGAG GAGCATGAGC AGAAGCGAAA GATTCGCACT GATGCGGTCT ACTGCGTAGA GTTACTGTTG AGTGCATCGC CTAGTTATTT CCGCCCAGAC TGCCCAACTA ATGCTGGGTA CTATGAAGGG CAAAAGTTGG ATGACTGGGT AGAAGCGACT CACCAATGGT TGGCGGATGA ATATGGCGAT CGCATTGTTA GAGCCGAGTT ACACCTGGAT GAAGCCACAC CCCACATTCA CGCTTACTTT GTGCCGATTG ATGATGCCGG GCAATTGCGC TGTAATCATT TCTTCGATGG CAGGCAAAAA ATTCATGAGT TTCAAGATTC TTACTACAAC ACGATGCGCC TAATTGGGTT GGAGCGTGGG ATTAGGGGAA GTAAAGCCCA GCACCAGGAC ATCAAGGATT TTTACCGCAT AGTGGAGGAG GGGCGAGACT TAGAAGTTGA TGAACTGAGT GCAGCGCAAT TAAAGGCTAA AGCGGCTGAC CGAGACAGAG CGACTGCGCG TAAACAGGAA ATGGAAGCTA CGGCAAAGGC GTTAGCTTTT GAGAATGAAC AATTAAGGCA ACGAATTGAG CAATCAGAGC AAGAAAATCA ACAATTACAA AAACTAACCG AATGGTCAAC TGATTTAGCT TTGGATGATG TTGCTTGGGA GTTGGGGCTA AACCGTGAGC ATGAGCAATG GCGGGGTCAT GGACATATCA TTACTATCGA TGGCTCTGGA TTTACTGACA TTAGCAATGG TTCAGTATTG TCGGGTCATG GAGCGCTCAA TTTGGTGAAA CACGTTAATA AATGTGACCA AGTTCAAGCT ATCACATGGT TGAGGGAGCG ATTTGGTGAG GTTGGGGCGC AACGTGCAGC GATCGCCTCT ACTAGAAGAA TGACAAGTGA GATTATCCAG ACCCAGCCAG TCCCTCAATT CACATTACCT ATTGAGGATA AAACTAGCTG GCAGCAAGTA GAACATTACC TCAAACATAA ACGGGGCATC CCCTCTGATA CTGAATAG
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Protein sequence | MSYAIARLKK LKRGNISGSA SHTARERETP NADPTQKNIR FIGSLEEDER LEDLVLAKIE EHEQKRKIRT DAVYCVELLL SASPSYFRPD CPTNAGYYEG QKLDDWVEAT HQWLADEYGD RIVRAELHLD EATPHIHAYF VPIDDAGQLR CNHFFDGRQK IHEFQDSYYN TMRLIGLERG IRGSKAQHQD IKDFYRIVEE GRDLEVDELS AAQLKAKAAD RDRATARKQE MEATAKALAF ENEQLRQRIE QSEQENQQLQ KLTEWSTDLA LDDVAWELGL NREHEQWRGH GHIITIDGSG FTDISNGSVL SGHGALNLVK HVNKCDQVQA ITWLRERFGE VGAQRAAIAS TRRMTSEIIQ TQPVPQFTLP IEDKTSWQQV EHYLKHKRGI PSDTE
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