Gene Ava_B0022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0022 
Symbol 
ID3677736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand
Start bp34276 
End bp35475 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content41% 
IMG OID637714731 
Producthypothetical protein 
Protein accessionYP_319925 
Protein GI75812306 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.599536 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCAA AATTAAGCCT CAATGATAAC GCCTTACGTT ACTTTATCTT TTTTGGTTTA 
GCAGGCAGTT TATTTATTCA CAGTTTTATC AAGTACGGGC TACTCAATCA AACCATTGGG
TTAATCATAC CTAAAGCCTC GGCACAAGTC CCAGTAGTCA ATGCACCCAA TGGTTTTGTG
CCTGATTGGT CACGCCTTAA ATTCAGCGAC ATGATTATAA CAGAGTCCGG CAGCGTGACC
TATCCTGGTT CAAGAGGTAT AGAAACTAGA ACCTGGACGG CTGGTCAAAG CATTGCTGAG
TTTATGGAAC TGGGTGATTT TGAAACCCCC CAATTAGCCA TAGAAAATCT GAAGCTTTCA
ACTATTGCTT CAGTACAAGG AATAAATTTA AGCGCTTTGA AACTAGGAGA TTTTGAACTT
AGCAAATGGC AAACTTTACC CTCTTTAGTT AAAGCCGTGC CTGGATTGGG AAACAGAAAT
ATTAATAGTG TGCGACCCAT CCGGGATTTT GCCCGGAGAT TTGGCATTAA TGGCGGTACA
ATCGCTAATG CTAGTCGCTA TTCCAATTTA CGTAATGTGC AATTGGGGCG AGGAATTAAC
TTAAGAAATT ATTCACTCAC ATCCATTCCT AATATTCAGA ACGCATCAAT TAATCGCTTT
ACTAATTGGC AGGACTCGAA AATTATTGGT GTGCCTGGAC TATCAACACT CACCTGGGAT
AATTTACCCG GACTGCGATC GCTTGACCTT TCATTTGTTG CCAAAGTTGA CTTGCCATTA
AGAGACGTTG AGGCTAATCG TATTCGCTCT ATTTCTGGTA GTTATCAACA AGGGTTTAAT
GTTCCTTGCT ACCAAACAAA TTGCGCTCAC ATGGAGATGT CTGGTATTGG TCAGACGACT
GGTACACAGT GGATGTCTGG TAAGTTTCAG AAAGTTAATG GTGGATTTGG AATTTTAAAA
GCTCTTAACG GTGGTAAAGA ACCTACGGGG CGAAACCCCT TTGGTTCCAG TTTTAAACAA
GTTGTTTGGA ATATTCATGA AGACACTGGG AAGGTGGAAA CTACAATGTT TTTCCGCATT
TGCAAAACCA TTCCCTTCAT TGGTCGCACT TGCAGTCCCT ACTTTATTGG CCCTGTGCCT
TTTATTGTCT ACCGGGAGAA AGACCCTATC GTTCTTGGTC AACCCAATTC TCTACCTTAA
 
Protein sequence
MKSKLSLNDN ALRYFIFFGL AGSLFIHSFI KYGLLNQTIG LIIPKASAQV PVVNAPNGFV 
PDWSRLKFSD MIITESGSVT YPGSRGIETR TWTAGQSIAE FMELGDFETP QLAIENLKLS
TIASVQGINL SALKLGDFEL SKWQTLPSLV KAVPGLGNRN INSVRPIRDF ARRFGINGGT
IANASRYSNL RNVQLGRGIN LRNYSLTSIP NIQNASINRF TNWQDSKIIG VPGLSTLTWD
NLPGLRSLDL SFVAKVDLPL RDVEANRIRS ISGSYQQGFN VPCYQTNCAH MEMSGIGQTT
GTQWMSGKFQ KVNGGFGILK ALNGGKEPTG RNPFGSSFKQ VVWNIHEDTG KVETTMFFRI
CKTIPFIGRT CSPYFIGPVP FIVYREKDPI VLGQPNSLP