Gene Ava_B0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0018 
Symbol 
ID3677732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand
Start bp30009 
End bp31109 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content38% 
IMG OID637714727 
Producthypothetical protein 
Protein accessionYP_319921 
Protein GI75812302 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTTAT TAGCAAAACT AGATGGTAGT GATTTAGCTA ATTTAGCTAA AGAAAACGCA 
GCTTCAGTCG CGCAAGGTTT TGATGAGCTT TGGGTCGAAA CTATTAATGG AGGTGTATAC
TGGGCAATTT GTAATGTTGG TGCTTTATTC GCTCTAGCAA CACTAACTTT TTTCATCATT
GAATGGACAA AAAGAATGAT GAATGGAGAG GAACAAAGGG CTTATACAGA TTTTATTTGG
CCTTTAATAG TTGTGGTTTT ACTCAGCAAT AAGGGAAATA TGCTAGGAAA ATCAACTTTT
GGGATTAGAA ACTACATAAA TAATGTAAAT AATACAGTTC TTAGCCAAGC TGCTGCGGGA
ATTGACCTCA AAAAAGCGTA TGAAAGTGCA TTAGGAACTG AAGCAGCACG TAGTGCAATT
GGACTGGCTG TAAACAGATG CCAAAATTCA TCATTAAGTC AACAAGAACA GATAGATTGT
TTAAAACAAG CCAAGGAAGA ATTAACCAAA AAATATCCTG ATAAGTTTAA TAAAAATAAT
GGAGTTTTTT CTTGGTTTAT TGATGCTGTT GATGGAATGA TTGATGCTTA TAGTGACCTA
GCTCAAGGGA AATCTTCAAT TACTGATGCG ATCATGTCTC CACTTAATGC CTTTGTCGGG
TCTGCAATCA CTGACGTAAT TACTATCATT CTAGTCGGCA TGAATGGAGC TTATCAATGG
GGGATTGAAT TGACCATGCT GATCACAGCA CTGCTTGGGC CGATGGCGGT TGGTGGTTCT
TTATTACCTT ACGGAGCTAA ATCTCTCTAC ACTTGGCTAA TTGGTTATTT CAGTGTCGGT
TTTGGAAAAT TATGCTTTAA TCTCATCGTA GGATTTGCTG GACAATTAGT CGCTGATTCT
AAGTCTTATC AGCCGATGTT TTTCTTGTTT ACTATAGGTA TTATTGCCCC ATTCTTAGCC
ACGGGGTTAG CGGCTGGTGG TGGGATTGCT GTTCTTACTC AGATCAATAA AGCTTCTGAA
ACTTATACTG GTATCGCTCT TGAAGTTACT AAAGGTATTG TGACTAAAGG CGGTAGTTTA
GTTGGAAAAA TTGCTAAATG A
 
Protein sequence
MFLLAKLDGS DLANLAKENA ASVAQGFDEL WVETINGGVY WAICNVGALF ALATLTFFII 
EWTKRMMNGE EQRAYTDFIW PLIVVVLLSN KGNMLGKSTF GIRNYINNVN NTVLSQAAAG
IDLKKAYESA LGTEAARSAI GLAVNRCQNS SLSQQEQIDC LKQAKEELTK KYPDKFNKNN
GVFSWFIDAV DGMIDAYSDL AQGKSSITDA IMSPLNAFVG SAITDVITII LVGMNGAYQW
GIELTMLITA LLGPMAVGGS LLPYGAKSLY TWLIGYFSVG FGKLCFNLIV GFAGQLVADS
KSYQPMFFLF TIGIIAPFLA TGLAAGGGIA VLTQINKASE TYTGIALEVT KGIVTKGGSL
VGKIAK