Gene Ava_B0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0017 
Symbol 
ID3677731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand+ 
Start bp29139 
End bp29858 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content40% 
IMG OID637714726 
Producthypothetical protein 
Protein accessionYP_319920 
Protein GI75812301 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.905302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCAA TCATGAAAAA ATTAACTATT AGTGCGATAG CTGCTACTAC TTTTGGCAGT 
TTATTTATTG CTGCACCTAG TTATGGCATT AGCATTAACG ATTTTTTTAG TTCCATCGTC 
TCAGATTTTC AAACTGAGAT TTCCAAAATC CAAGATGATG CTAAAGAAAA AATTAATATC 
AGTTGGGCTG GAATCAAAAC AGATGCTATC GCCGCAATTG ATAGTTCTAT CGGACAATTG 
GGTGCGCCTG ACCCGATTGC TTCAGCTGAT CAGTTGAAAG ATTCACTTAA GGATGACTAT 
TCTTATCCTG TTGCTCAACA GAATGCACAA CAACTAGAGC GTCAATTAAC TCTGGCTTCT 
GTCTCCAGCA TCGTTAGCAA AGACGGACAA CAACAAACCC AAGAAAAAAT TGATACTACT 
GCTCAAATCG CCCAGCAAGC AAAAAGTATT GCTGATGAGG CTCAGAATAT GGATGCCTCT 
CAGAATGTAC TTAAAGCGAT CGCTGCTCAA AATGGGCTAA TTGTATCAAT GCTGGCAGAG 
CAACGTACTG ATTCTTTATC TGCCCGACAG GACAATGCTT ACTCTAACCT GATGCTGACA 
CAAGTAGCTG AACACCTTGA TTCAGAGCGG AAAAAAGAGA ACTCTCAAGA AGATGGCAGA 
TTGTCTCTAG TTCATGAAAT AGTGCTTAAT GCACGACTAG ATCCAGCTTC TGCTGATTAA
 
Protein sequence
MKPIMKKLTI SAIAATTFGS LFIAAPSYGI SINDFFSSIV SDFQTEISKI QDDAKEKINI 
SWAGIKTDAI AAIDSSIGQL GAPDPIASAD QLKDSLKDDY SYPVAQQNAQ QLERQLTLAS 
VSSIVSKDGQ QQTQEKIDTT AQIAQQAKSI ADEAQNMDAS QNVLKAIAAQ NGLIVSMLAE 
QRTDSLSARQ DNAYSNLMLT QVAEHLDSER KKENSQEDGR LSLVHEIVLN ARLDPASAD