| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_B0007 |
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| Symbol | |
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| ID | 3677748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007410 |
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| Strand | + |
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| Start bp | 8989 |
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| End bp | 11457 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637714716 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_319910 |
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| Protein GI | 75812291 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.286469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATC AACAATTGCT CAAGTACCTG CTCATAGTGG CAGTAAGTTG TTTGTTAGCT
ATCAGTGAGC CAACATCATT GATGGCTCAA GCGAATGCTG AAAAATTACA GCAAGCGCAA
TCACTGATCC AACAAGGACA AAAACAGTTA AATCAAGGAC AGGCATCACA AGCATTACAG
TCTTGGCAGC AAGCAACGCA AATTTATCGA CGGCTTCAAG ATGAACAGGG AATAAAAGGC
AGTCTGATCA ATCAAAGTAT CGCATTGCAA ACATTAGGTT TAACCCCTCG TGCTTGCAAT
GTACTGATAG AGGCATTGAA ACTAAATTCT GCCTCTGGAA TTTGTACCTC TCCGACACCA
CCGAATGAAA CTACAAAACT ATTAGAGCTA TTTGACAAAA AAACAGTCTC ATCACTTGAT
TTGTTGGCAT TACAAAATTT AGGTAATGCA CTGCGTAAAT TAGGAAAACT TACTGAATCA
GAAGCAGTAT TCAGCAAAAC TCTTATGCTC TCTGAAGAAC AGCCTAGTTT CAATACTAGT
TCAGTATTAT TAAGCTTAGG CAATACTAAA TTTTATGCTT ATAAATTCTT CAAAGATAAA
TATCTGCAAG TAGAAGAACC CGCATTCCGC CAAAAGATAT CCAACTTAAG CCAACAAAAA
GCATTAGAAG CGATTGAGAT ATATCAACAA ATTCTTAGCC AGAAGAATAT AACTTCTTCT
ATCAAGTTAC AGTCACTCGT ACAAAAGTTA AGCTTGTTAT TAGATTATAA GCAGTGGCTA
AATAATACTA AATCTCAAAA CCCTTCCCTA AAAAATGAGC AGCAAGTTCA AGAGACAGTC
AATGTTTTAT TAAATAATTC TTATCTGTTT GAAGAAGTCC CAATAAATGA ATCGATTTAT
TCTCAATTAA ATTTTGCTAA AAGTTTGAAT CAAATTCCTG ATAAAACACT AAATTCATTA
GCTATAAAAT ATACATTAGC AAGTTTACAA AAAGCCAATA GTATAAATAA TAAAAGATTA
ATCTCGTATA GTAGTGGTAT TTTAGGAGAG CTACAGCCAG AAAAAGCTCA TACTTATTTA
AGTGAAGCGC TAAGTATAGC TCAATCGATC CAAGCCTGGG ACATTGCCTA TAGATGGCAA
CAACAATTAG GTAAATTGTA TAAACAACAA AGAAAGAATC AAAAAGCTAT TACATTTTAT
GAAGCAGCTA TTGAAAATTT AACTAAAGTT AGAGATAACC TTTCCACAAA TAATTTAGAT
TTACAATTTT CATTTTATGA AAAAGTCGAA CCTATCTATC GAGATTATAT ACGCTTACTA
ATTAGCAGTT CTCATCTTCA ACTAGATAAA GCAATTCAAG TTTACGAACA ACTGCAATTG
GCAGAGTTAG AAAATTACTT AAAATGTGGC AAGCTGGAAT TTATACCTAT AAATAGTATT
GCTAATCTAA AAAATAAGCC GACAGTAATT AATATTATAG ACTTGGGTGA CAGTATAGAA
GTAATTGTTC GCTCACCAAA TCAATCATTA CATCACCACT CAGTCAATGC CAAAAACATC
AGAACTAATC TTGAAGATTT TTTAAATACT TTACAAGATG AAGAATTTGC TGATATCGAG
AAATCTGTAA TTATTACTCA TTCGCAGATA TTGTATCAAG AACTAATTGC ACCCATTAAA
AAATATTTAC CATCATCTGG AACACTGCTT TTTACTCTTG ATAATTCTTT CCAAAGTATT
CCGATGAGTC TACTTCACGA TGGGAGAGAT TACTTGTTTA AAAATTATAG TATTACAACC
ACATTAGGTT CTCGAATCCG ACCACCCAAA GCTTTGCTCA AAGAACAGCT AAATGCTCTC
ATTGCTGGGC TTTCTCAATC TAGTCCTAGT TTTCATTCAA AAAACGCCCC TCCAGGATTA
AAACCTTTAC CAGAAGTAGA AAAAGAAGTA GTTGATGTTA AACAACAGAC TAGAGGATCA
ATTAAGTTAC TAAATGAACA ATTTACTAGT GACAATTTTC AACAAGAATT GAAAACGGCT
AAATTTCCTA TTGTTCATGT TACTACTCAC GGCCAGTTTA GTTCTGACCC TGAACAAACA
GTACTTTTAG CTTGGGACAA ACCCATTAAC ATTCAAGAAT TTGATGGCTG GTTAAAAGTT
CAAAATAACC AAGACCCTAT TGAGTTATTA GTTCTCAGCG CTTGCCAAAC TGCTAAAGGT
AACAAACGCT CTACTTTAGG TATCGCTGGG GTAGCAGCAC AGGCTGGCGC AAGAACTACA
CTCGCTTCCT TGTGGTTAGT AGATGCCGAA TCTACAGCTA TGCTTGTTGA ACAATTCTAT
AAAGGTTTAA ATAACAACCT CTCTAAAGCT GAAGCACTGC GACAAGCTCA AATAAGCTTA
CTTTCTCATC CTCAATATCA ACACCCTTAC TACTGGGCAG GATTTGTTCT GGTTGGTAGT
TGGCTTTGA
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| Protein sequence | MKNQQLLKYL LIVAVSCLLA ISEPTSLMAQ ANAEKLQQAQ SLIQQGQKQL NQGQASQALQ
SWQQATQIYR RLQDEQGIKG SLINQSIALQ TLGLTPRACN VLIEALKLNS ASGICTSPTP
PNETTKLLEL FDKKTVSSLD LLALQNLGNA LRKLGKLTES EAVFSKTLML SEEQPSFNTS
SVLLSLGNTK FYAYKFFKDK YLQVEEPAFR QKISNLSQQK ALEAIEIYQQ ILSQKNITSS
IKLQSLVQKL SLLLDYKQWL NNTKSQNPSL KNEQQVQETV NVLLNNSYLF EEVPINESIY
SQLNFAKSLN QIPDKTLNSL AIKYTLASLQ KANSINNKRL ISYSSGILGE LQPEKAHTYL
SEALSIAQSI QAWDIAYRWQ QQLGKLYKQQ RKNQKAITFY EAAIENLTKV RDNLSTNNLD
LQFSFYEKVE PIYRDYIRLL ISSSHLQLDK AIQVYEQLQL AELENYLKCG KLEFIPINSI
ANLKNKPTVI NIIDLGDSIE VIVRSPNQSL HHHSVNAKNI RTNLEDFLNT LQDEEFADIE
KSVIITHSQI LYQELIAPIK KYLPSSGTLL FTLDNSFQSI PMSLLHDGRD YLFKNYSITT
TLGSRIRPPK ALLKEQLNAL IAGLSQSSPS FHSKNAPPGL KPLPEVEKEV VDVKQQTRGS
IKLLNEQFTS DNFQQELKTA KFPIVHVTTH GQFSSDPEQT VLLAWDKPIN IQEFDGWLKV
QNNQDPIELL VLSACQTAKG NKRSTLGIAG VAAQAGARTT LASLWLVDAE STAMLVEQFY
KGLNNNLSKA EALRQAQISL LSHPQYQHPY YWAGFVLVGS WL
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