Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_B0002 |
Symbol | |
ID | 3677743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007410 |
Strand | - |
Start bp | 1478 |
End bp | 3214 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637714711 |
Product | ankyrin |
Protein accession | YP_319905 |
Protein GI | 75812286 |
COG category | [R] General function prediction only |
COG ID | [COG0666] FOG: Ankyrin repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.216352 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATACCAT TTGCTGTTGA ATCTAAGATA CCAAAGAAAA CCTCTAATTC CATCTCTCCT TTTTGCAAAG TATTATCGGA AAAATTTAGT CCCTTCGGTG CTGCTCCCGA TTTATCAGTA GCTTTAGGTA AGGCCATTGC CGAAGGAGGT AATTTGAATC AACCCTGCGA TATCTTTGGT GAAAAGTGGC TACCGCTCAA CTTTTTACTA TCCACAGACG AAGAACTGTC TCAGCGTTTA ATCCAAACTG GGGTAAATGT AAATGCCAAG GATGGGAAAG GAGATACTCC CCTACATTAT TTAGGAAAAT CTGAGAAAAA TGCGCGATTA CTTCTGAGTA GAGGAGCAAA AGTGAATGTC GGCAACCAAA ATGGTAATAC CCCACTCCAT AATCTTTTTG GACAGAAAAC CGCTTATGTA ATCAAACTTT TGATAGATCG GGGTGCTAAG GTTAATGCTA GAAATCAAGA GCAAATGACA CCGCTACATT TTGCTGCTAA TTCCGGAAAA GCTGATATCA CGGAGCTATT AATTAGTCGT GGTGGGGATG TAAATGCTCG TAGCACTCAG AACTGGACAC CACTACACTA TGGAGCATCA AATCTAGAAG TCGCCAAAAA ACTAATCCAA GCAGGTGCTG ATCTAACTAT CCAAAATCGT GAAGGGGCTG TGATTCACTC CAGCAGTTTG GAACCAGCAG TACTAAAACT CCTGCTCGAT AGGGGAGTTA ATGTTAATTT ACGCAATCGT CAGGGGCAAA CTCCACTCCA CATTCATCGT TTCCAACCCG CTCTAGTGAA ATTGCTATTG GCTCGAAAAG CGCAAGTTAA CCTACGAGAT GCTCAAGGTA AGACTCCTCT GTACGATGTT AACCTGGAAG TGGCTCGACA ACTGGTTGCG GCTAATGCAG ATTTAAATGT TCAAGATAAT TTAGGAAGAA CACCTCTGCA CCAAGCAGTA TTGGAGGAAC AAAGTTTCTT TGGTTCGGAA TTAGTAACAC TATTTCTCAG TAAAAATGCT AGGGTTGACC TCAAAGATAA GCAAGGTAAG ACTGCTCTAG ACCTAGCTCG ACAACTTAAT AAAACCCAAA TCATTAATTT GTTAGAGCGA CATATGGCAA CTAAAAATTC TCCTGGTAGT GGAACAAGCA CAACCAAAGC AACAGAACAA CTCCAGCAGT TCCTCAAGTC TAAAAACTGG AGTGCTGCCG ATCAAGAAAC CCGCCGTCTC TTATCACCTC AAAAAGATCT CTTTGGACTT AACGCTGCCA CCATACCTCT AGATTTAATT CAAGAGATTG ATCGAGCTTG GTTAGTAGCT AGTGATGGAA GGTTTGGACT CAGTGTCCAA GCAAAGATTT GGCAAAAGGT AATAGCATCT CATCCGAACA ATTCCGAAAC TGCCGCCAAT ACCTTTCGCG ATCGAGTCGG TTGGAAACTC AAAGTTGCTC GAACCGAAAA CGATTTTATC AGCAGCGACT GGCTGAATGA ATCCGAACTC AATTATTCAC TGCAAGCTCC TGTCGGACAC TTACCCTGGG CTGGTGTTTC AGACGCATCT GTACTATCGC TTGCAGTTCC TCCCCCTGGA GAACACTGTG GTAGCTGTAC CATCGATGCA ATGTTTCTGC GAGATGGGCG ATTTTATAAA TATCTGCCTC AACTTTTTGC ACGGGTTAAA ATGGCATTGA ATATGAATGT CAGTAGACCG AAAAGTTTGG CGATCGCTAA AAAATAG
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Protein sequence | MIPFAVESKI PKKTSNSISP FCKVLSEKFS PFGAAPDLSV ALGKAIAEGG NLNQPCDIFG EKWLPLNFLL STDEELSQRL IQTGVNVNAK DGKGDTPLHY LGKSEKNARL LLSRGAKVNV GNQNGNTPLH NLFGQKTAYV IKLLIDRGAK VNARNQEQMT PLHFAANSGK ADITELLISR GGDVNARSTQ NWTPLHYGAS NLEVAKKLIQ AGADLTIQNR EGAVIHSSSL EPAVLKLLLD RGVNVNLRNR QGQTPLHIHR FQPALVKLLL ARKAQVNLRD AQGKTPLYDV NLEVARQLVA ANADLNVQDN LGRTPLHQAV LEEQSFFGSE LVTLFLSKNA RVDLKDKQGK TALDLARQLN KTQIINLLER HMATKNSPGS GTSTTKATEQ LQQFLKSKNW SAADQETRRL LSPQKDLFGL NAATIPLDLI QEIDRAWLVA SDGRFGLSVQ AKIWQKVIAS HPNNSETAAN TFRDRVGWKL KVARTENDFI SSDWLNESEL NYSLQAPVGH LPWAGVSDAS VLSLAVPPPG EHCGSCTIDA MFLRDGRFYK YLPQLFARVK MALNMNVSRP KSLAIAKK
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