Gene Ava_B0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0002 
Symbol 
ID3677743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand
Start bp1478 
End bp3214 
Gene Length1737 bp 
Protein Length578 aa 
Translation table11 
GC content43% 
IMG OID637714711 
Productankyrin 
Protein accessionYP_319905 
Protein GI75812286 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.216352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACCAT TTGCTGTTGA ATCTAAGATA CCAAAGAAAA CCTCTAATTC CATCTCTCCT 
TTTTGCAAAG TATTATCGGA AAAATTTAGT CCCTTCGGTG CTGCTCCCGA TTTATCAGTA
GCTTTAGGTA AGGCCATTGC CGAAGGAGGT AATTTGAATC AACCCTGCGA TATCTTTGGT
GAAAAGTGGC TACCGCTCAA CTTTTTACTA TCCACAGACG AAGAACTGTC TCAGCGTTTA
ATCCAAACTG GGGTAAATGT AAATGCCAAG GATGGGAAAG GAGATACTCC CCTACATTAT
TTAGGAAAAT CTGAGAAAAA TGCGCGATTA CTTCTGAGTA GAGGAGCAAA AGTGAATGTC
GGCAACCAAA ATGGTAATAC CCCACTCCAT AATCTTTTTG GACAGAAAAC CGCTTATGTA
ATCAAACTTT TGATAGATCG GGGTGCTAAG GTTAATGCTA GAAATCAAGA GCAAATGACA
CCGCTACATT TTGCTGCTAA TTCCGGAAAA GCTGATATCA CGGAGCTATT AATTAGTCGT
GGTGGGGATG TAAATGCTCG TAGCACTCAG AACTGGACAC CACTACACTA TGGAGCATCA
AATCTAGAAG TCGCCAAAAA ACTAATCCAA GCAGGTGCTG ATCTAACTAT CCAAAATCGT
GAAGGGGCTG TGATTCACTC CAGCAGTTTG GAACCAGCAG TACTAAAACT CCTGCTCGAT
AGGGGAGTTA ATGTTAATTT ACGCAATCGT CAGGGGCAAA CTCCACTCCA CATTCATCGT
TTCCAACCCG CTCTAGTGAA ATTGCTATTG GCTCGAAAAG CGCAAGTTAA CCTACGAGAT
GCTCAAGGTA AGACTCCTCT GTACGATGTT AACCTGGAAG TGGCTCGACA ACTGGTTGCG
GCTAATGCAG ATTTAAATGT TCAAGATAAT TTAGGAAGAA CACCTCTGCA CCAAGCAGTA
TTGGAGGAAC AAAGTTTCTT TGGTTCGGAA TTAGTAACAC TATTTCTCAG TAAAAATGCT
AGGGTTGACC TCAAAGATAA GCAAGGTAAG ACTGCTCTAG ACCTAGCTCG ACAACTTAAT
AAAACCCAAA TCATTAATTT GTTAGAGCGA CATATGGCAA CTAAAAATTC TCCTGGTAGT
GGAACAAGCA CAACCAAAGC AACAGAACAA CTCCAGCAGT TCCTCAAGTC TAAAAACTGG
AGTGCTGCCG ATCAAGAAAC CCGCCGTCTC TTATCACCTC AAAAAGATCT CTTTGGACTT
AACGCTGCCA CCATACCTCT AGATTTAATT CAAGAGATTG ATCGAGCTTG GTTAGTAGCT
AGTGATGGAA GGTTTGGACT CAGTGTCCAA GCAAAGATTT GGCAAAAGGT AATAGCATCT
CATCCGAACA ATTCCGAAAC TGCCGCCAAT ACCTTTCGCG ATCGAGTCGG TTGGAAACTC
AAAGTTGCTC GAACCGAAAA CGATTTTATC AGCAGCGACT GGCTGAATGA ATCCGAACTC
AATTATTCAC TGCAAGCTCC TGTCGGACAC TTACCCTGGG CTGGTGTTTC AGACGCATCT
GTACTATCGC TTGCAGTTCC TCCCCCTGGA GAACACTGTG GTAGCTGTAC CATCGATGCA
ATGTTTCTGC GAGATGGGCG ATTTTATAAA TATCTGCCTC AACTTTTTGC ACGGGTTAAA
ATGGCATTGA ATATGAATGT CAGTAGACCG AAAAGTTTGG CGATCGCTAA AAAATAG
 
Protein sequence
MIPFAVESKI PKKTSNSISP FCKVLSEKFS PFGAAPDLSV ALGKAIAEGG NLNQPCDIFG 
EKWLPLNFLL STDEELSQRL IQTGVNVNAK DGKGDTPLHY LGKSEKNARL LLSRGAKVNV
GNQNGNTPLH NLFGQKTAYV IKLLIDRGAK VNARNQEQMT PLHFAANSGK ADITELLISR
GGDVNARSTQ NWTPLHYGAS NLEVAKKLIQ AGADLTIQNR EGAVIHSSSL EPAVLKLLLD
RGVNVNLRNR QGQTPLHIHR FQPALVKLLL ARKAQVNLRD AQGKTPLYDV NLEVARQLVA
ANADLNVQDN LGRTPLHQAV LEEQSFFGSE LVTLFLSKNA RVDLKDKQGK TALDLARQLN
KTQIINLLER HMATKNSPGS GTSTTKATEQ LQQFLKSKNW SAADQETRRL LSPQKDLFGL
NAATIPLDLI QEIDRAWLVA SDGRFGLSVQ AKIWQKVIAS HPNNSETAAN TFRDRVGWKL
KVARTENDFI SSDWLNESEL NYSLQAPVGH LPWAGVSDAS VLSLAVPPPG EHCGSCTIDA
MFLRDGRFYK YLPQLFARVK MALNMNVSRP KSLAIAKK