| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_3130 |
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| Symbol | |
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| ID | 3676099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 3383309 |
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| End bp | 3384730 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637714695 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_319729 |
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| Protein GI | 75677308 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.308652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCGC TCGCTCTCAT GGGCCTCGCC CTCGCCGCTA TTTTAGCGGC GGGGGCCGGA
GGCTATTGGG CGGGTGTTCG GAATCTTCCG ATCACCGGCC TCCGCGAATG GCTTGGTGTC
GAGGCAACCT TCGCAGCGGC AGAGCCGGCC GGCACGGGAG CGGTGATTTA CTATCAGGAC
CCTGACGGTA AGCCAGCTTA CTCGGCAACA CCGCGCAAAA CCGCAGACGG CCGTGCTTTC
CGCGCCGTTC GCGCCAGCGA GGATGTGAGC TTCGAAGAGA AGCAGCCGAC GACAGCCGAG
GCGACCGGGC AGCCCGGCGC GCGGCGCGTC CTCTACTACC GCAATCCGAT GGGTCTGCCG
GACACCTCAC CGACGCCGAA GAAGGACTCG ATGGGGATGG ACTACATCCC GGTCTATGAA
GGCGAGGATG ACGGCGGCTC GGTCGTGCGG GTGTCGCTTG GCAAACTCCA ACGGACCGGT
GTGCGATCCG AGTTGGTCAA GCGCCGCACC GTCGGCAGAC TGATGCGCGT ACCGGGAATG
ATCCAGCTCG ACGAGCGGCG CATCTCTGTG GTTGCAACGC GGAGCGATGC TTTCGTCAAC
GAAGTGGCGA ATGTTACGAC TGGAGACCGA GTGACGAAAG GCCAGGTACT GGTCCGGCTC
TACTCGCCCG ACATCGCTGC CGCGGGTGCG CTGTTTCTCA GCGATCTCAA TATTGGCGGT
CGCGACGGCG CTATCGGCGG TGCTCGCCAG CGCCTGGAAA ATCTGGGAGT ACCACCCGAG
GCCATCGCCG AGATCGAGCG TACCCGCAAG GTGCCGCTAT CGATCACATG GCGCGCGCCG
CGCGACGGCG TCGTGCTCGA ACGCAATGTC GTTGAGGGCA TGAAGGCAGC GCCAGGCGAT
GTGCTATTCC GCCTCGCCGA CATCTCGACC ATCTGGGTGC TCGCGGACGT TCCGGAGTTC
GATCTTGCGG CCGTTCGAAT TGGTGCGCCG GTGACGGTAC GAGTCCGAAG CCTACCGGGG
CGCTCCTTCG AAGGGCGTGT GTCGCTGATC TATCCTCAGG TCGGTGAAGC GACGCGAACC
GCGCGCGTGC GGATCGAAAT TGCCAATCCT GACGGTGTTC TGCTCCCTAA TATGTATGCC
GAGGTGGAGA TCGGCACCGG CGATGCCGCG CCTGTGGTTG CCGTTCCAGA CAGCGCGGTG
ATCGACACCG GCACGCGACA GGTCGTGATC ATAGATCGTG GAGATGGCCG GTTCGAACCG
CGCGACGTGA AGATCGGCTT GCGTGGCGAA GGGCTCACCG AAATCCGCGA GGGGATTGCG
GAGGGTGACC GTGTCGTTGT CGCGGCGAAC TTCCTGATCG ACGCCGAGAG CAATCTAAAG
GCGGCGCTCC GCGGCCTGAC CCCACCGGAG GCCCGGCCAT GA
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| Protein sequence | MKPLALMGLA LAAILAAGAG GYWAGVRNLP ITGLREWLGV EATFAAAEPA GTGAVIYYQD
PDGKPAYSAT PRKTADGRAF RAVRASEDVS FEEKQPTTAE ATGQPGARRV LYYRNPMGLP
DTSPTPKKDS MGMDYIPVYE GEDDGGSVVR VSLGKLQRTG VRSELVKRRT VGRLMRVPGM
IQLDERRISV VATRSDAFVN EVANVTTGDR VTKGQVLVRL YSPDIAAAGA LFLSDLNIGG
RDGAIGGARQ RLENLGVPPE AIAEIERTRK VPLSITWRAP RDGVVLERNV VEGMKAAPGD
VLFRLADIST IWVLADVPEF DLAAVRIGAP VTVRVRSLPG RSFEGRVSLI YPQVGEATRT
ARVRIEIANP DGVLLPNMYA EVEIGTGDAA PVVAVPDSAV IDTGTRQVVI IDRGDGRFEP
RDVKIGLRGE GLTEIREGIA EGDRVVVAAN FLIDAESNLK AALRGLTPPE ARP
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