Gene Nwi_3120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_3120 
Symbol 
ID3676089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp3375563 
End bp3376264 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content59% 
IMG OID637714685 
Producthypothetical protein 
Protein accessionYP_319719 
Protein GI75677298 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.239583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAAGG GTACTTTTCA AGCTGAGCTT GTTAAGCAGC CCCGAGTCGC GACCTCGCGG 
TCGCTACCGC TGACACCGCT TAACCCTGGT CCGGTACCGA AGGACTGGCA GGTTAAGACG
ATCGCCCGAG AATGGAAACT TCGCTGTTTG GGCGAGATCA CTCGCGAACT GACGTGGCGC
CACAACGACA GAAATTTTGG CCGCGAATTG GTGATGGGCG TCACCAACTC GCGCGGGATC
GTGCCGATGC AGACCATCGG CAGCGATCTG ACCAGATACA AGATTCTGCT ACCCCGCGCC
TTTGCCTACA ACCCGATGCG CATCAAGGTC GGCTCCATAG CCAGGCTGCG ATTGCCTTCC
GAAGTGCTGG TCAGCCCCGA CTATGTTCTG TTCGAATGCG TTCCCGGCAA GCTCGACCCG
GACTTCCTCA ATCACCTGCG CCAGAGCCAT TTCTGGGATC ACTACATCAA CGCAGGTGGA
TCCGGCAGCG TGCGTATGCG AGCCTATTAT GATGACCTCG CCGCGCTGCG TCTGAAACTT
CCAGGATTTG CCGAGCAGCA CAGAATCTCG GCGATGCTGA ATACGGCCCA AGGCGAGATC
GCGCTTGTCG CCACCGAAAT CGAAACTCTC ACCCGCCAGA CGCGCGGCCT CATGCAGAAG
TTGCCGACCG GCGAACGGCG CGTGAAGGTG GGGGCCAACT AA
 
Protein sequence
MLKGTFQAEL VKQPRVATSR SLPLTPLNPG PVPKDWQVKT IAREWKLRCL GEITRELTWR 
HNDRNFGREL VMGVTNSRGI VPMQTIGSDL TRYKILLPRA FAYNPMRIKV GSIARLRLPS
EVLVSPDYVL FECVPGKLDP DFLNHLRQSH FWDHYINAGG SGSVRMRAYY DDLAALRLKL
PGFAEQHRIS AMLNTAQGEI ALVATEIETL TRQTRGLMQK LPTGERRVKV GAN