Gene Nwi_3119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_3119 
Symbol 
ID3676088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp3374542 
End bp3375570 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content61% 
IMG OID637714684 
Productputative DNA-binding protein 
Protein accessionYP_319718 
Protein GI75677297 
COG category[R] General function prediction only 
COG ID[COG3943] Virulence protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAG GTGAACTGAT CCTTTACAGC ACCGAGGACG GCGCCGCGAC TGTTGGACTG 
CGGGCCGTGG ACGGGACCGT ATGGCTGAGC CAGCGGGAAA TCGCGGAGTT GTTCGACAAG
GATGTGCGCA CTGTCAACGA GCACATCCGC AATGTCTTCG CCGAGGGGGA GTGCGACCCC
GAGGCAACTA TCCGGAAATT CCGGATAGTT CAAACCGAGG GCGCTAGGCA GGTCGAACGC
GGAGTGGATG CCTATAACCT CGATGTCATC CTCTCGGTCG GCTACCGCGT TCGCTCTGCC
CGAGGCACCC AGTTTCGCCG CTGGGCCACC ACCGTCTTGC GCGAATATCT GGTCAAGGGC
TTCGTGATGG ACGACGCCCG GCTGAAACAA GCCGATCAAT GGGACTATTT CGACGAGTGG
CTTGCTCGCA TCCGGGATAT CCGCGCCTCG GAAAAGCGCT TCTATCATAA GGTACGCGAC
CTTTACACCA CCGCCATCGA TTACGACAAG ACGTCGGAAC AAGCGCAGGC CTTCTTCAAG
AAGGTGCAGA ACAAAATGCT CTGGGCGGTG ACCGGCAAGA CCGCCGCCGA ACTGATCGAA
AGCCGCAGCG ACCCGGACGC GCCCAACATG GGCCTGACCA GTTGGAAAGG CTCGGTCGTG
CGCAAGGGCG ATGTCGGTAC CGCCAAAAAT TACCTCAGAG CCGAGGAGGT CGAGGAACTG
AACCGCATCG TCGTGATGTA TCTCGACTAT GCCGAGGACC AGGCCAAGCG CCGCCGTCCT
GTCACCATGG CCGAGTGGTC CGATAAGCTC GACGCCTTCC TATCTTTCAA TGAGCGCGAC
GTGCTGACCC ACGCCGGTCG GCTGCGGATG GACGTAGCGC AGAGGCTGGC CGCCGAGCGG
TTCGAGGTAT TCAACGCGAG CAGGCGCGCG GCCGAGGCGC TGGCGGCAGA CGCGGAGGAT
ATCGCCCAGC TGGAGGAGAT GGAGAAGGCA GCCAAGAAGG GCCGGAAGAA GGGTGGCGGC
GATGCTTAA
 
Protein sequence
MSEGELILYS TEDGAATVGL RAVDGTVWLS QREIAELFDK DVRTVNEHIR NVFAEGECDP 
EATIRKFRIV QTEGARQVER GVDAYNLDVI LSVGYRVRSA RGTQFRRWAT TVLREYLVKG
FVMDDARLKQ ADQWDYFDEW LARIRDIRAS EKRFYHKVRD LYTTAIDYDK TSEQAQAFFK
KVQNKMLWAV TGKTAAELIE SRSDPDAPNM GLTSWKGSVV RKGDVGTAKN YLRAEEVEEL
NRIVVMYLDY AEDQAKRRRP VTMAEWSDKL DAFLSFNERD VLTHAGRLRM DVAQRLAAER
FEVFNASRRA AEALAADAED IAQLEEMEKA AKKGRKKGGG DA