Gene Nwi_3090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_3090 
Symbol 
ID3675416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp3354265 
End bp3354963 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content64% 
IMG OID637714655 
Producthypothetical protein 
Protein accessionYP_319689 
Protein GI75677268 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTCA CCGAACCTCC GCCGATGACC CGAGCGCTCG CGATCAGCTA CGCGATCGGA 
CTGCCGCTGG CATTGCTCGC GATCGTGTTC CTTCCGGTCG GTCGCCTCGA TTGGTCGCCA
GGGTGGTTCT TCGTCACCTT CCTTATTGTC GTCTATGGCA TATCGGCGCT GGTCTTGTGG
CGCGTGAACC CCGTGATCTA TCGGGCGCGC AGCCGCTTCC AGCCGGGCAC GGAACGCTGG
GACCGCATCC TGCTCGCTTT GATGCTCCCG GCGATGGTCG CGGAGATTCC GGTGGCTACC
TTCGACGCCG GCAGGATGTC CTGGTCGGAT GTCCCGTTCT CAATCGTGGT CCTCGGCTAT
GTCCTGCTTG TTGCCGGCAT CGCGCTCGGC GCGTGGGCGC AAGCCGTCAA TCGCTTCTTT
GAGCCCGGCG TGCGCATCCA GCGCGAGCGC GGCCAGCACG TCATCACGGC CGGGCCTTAC
CAATTCGTGC GCCATCCCGG CTATGTCAGC GCGATCATGA TATTCGTCGG CGTACCGTTT
TCGCTCGCGT CATGGTGGGC GCTGATCCCG GCCGCTTTCG CGACCGCCAT CCTGATCCTG
CGGACGAGTT GGGAGGATGC GCTGTTACGC ACTGAGCTTG ACGGCTACGC CGACTATGCG
CGCCGCACCC GATTCCGGCT CATGCCGGGC ATCTGGTGA
 
Protein sequence
MTVTEPPPMT RALAISYAIG LPLALLAIVF LPVGRLDWSP GWFFVTFLIV VYGISALVLW 
RVNPVIYRAR SRFQPGTERW DRILLALMLP AMVAEIPVAT FDAGRMSWSD VPFSIVVLGY
VLLVAGIALG AWAQAVNRFF EPGVRIQRER GQHVITAGPY QFVRHPGYVS AIMIFVGVPF
SLASWWALIP AAFATAILIL RTSWEDALLR TELDGYADYA RRTRFRLMPG IW