Gene Nwi_3080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_3080 
Symbol 
ID3675406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp3343976 
End bp3344929 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content64% 
IMG OID637714646 
ProductFecR protein 
Protein accessionYP_319680 
Protein GI75677259 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCCGG ATCCCGTGAC GGATCAGGCC CTCGACTGGT TCATTCGACT CCAAGAAGAG 
CGTGATTCCG CGACGCTGGC GGAGTTTGAG GCGTGGCGGC GATCGGACAT GCGCTGCGGC
CAGGCATTTG CGCGTATCTC CGCGATGCAC GGCATGGCTT CCTTGCGCAA GGCAACCGAG
ACCGACGCCC GCCGGCTCGG GCTGGACGTG CCCGCGTCCG CGGTTTCGGT GCGGGAACGG
AAGGCACCAC GAAGCTGGAT CCCGGCTGTT GCCGCGGCCG TTCTCCTGCT GCTGATAGGC
TGGCAGCAGT TGCCGGGCGT CATGCTGCGG TGGCAATCTG ACTATATGAC AGCAACCGGC
CAGCGGGATA CCATCACGCT TCCGGACGGC TCGACCGCGA CGCTCAACAC CTCGACCGCC
ATAGCCGTTG ATTTTTCTGG CGGTCGCCGC CGGGTTACAT TGCTCGACGG TGAAGCCTAT
TTCGACGTCC AGCATGACCC GTCGCGCCCA TTTGTTGTCG CAGGCCATTT CGCGCAGGTC
GAGGTCAAGG GGACTGCTTT CAGCGTCAGG ACCGAAAATG ATCAGGACAC TGTCGTGCTC
GAACGTGGCC GCGTTGAGGT GAGCAGCCAG GCCGGTCACG AGTTCCTTGC GCCGGGGCAG
ATGATTGTCG CCAGCGCGTC CGGCTTATCT GCGGTGGAGG CAGCGGACAT CGATAAATCG
CTTGCATGGC GCGACGGCCG GATCGTGTTT CGCGACCGGC CATTCCGCGC CGCATTGGCC
GACCTCGAGC GCTATTTCGA CGGACGGGTC GTGGTTATAG GCAGCGTGGC CTCGGATCGC
CTGGTGAGCG GACATTATCG CATCGATGAT CCTGACGCGG CGATCAGGAC GCTCGCGCGA
TCGGCCGGTG CCGACGTCAC GCGGCTTCCG GGTGGAATCT TGATCTTGCG TTAA
 
Protein sequence
MHPDPVTDQA LDWFIRLQEE RDSATLAEFE AWRRSDMRCG QAFARISAMH GMASLRKATE 
TDARRLGLDV PASAVSVRER KAPRSWIPAV AAAVLLLLIG WQQLPGVMLR WQSDYMTATG
QRDTITLPDG STATLNTSTA IAVDFSGGRR RVTLLDGEAY FDVQHDPSRP FVVAGHFAQV
EVKGTAFSVR TENDQDTVVL ERGRVEVSSQ AGHEFLAPGQ MIVASASGLS AVEAADIDKS
LAWRDGRIVF RDRPFRAALA DLERYFDGRV VVIGSVASDR LVSGHYRIDD PDAAIRTLAR
SAGADVTRLP GGILILR