| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_3069 |
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| Symbol | dapD |
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| ID | 3674533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | - |
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| Start bp | 3334088 |
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| End bp | 3334933 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637714634 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_319669 |
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| Protein GI | 75677248 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.604164 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTACCG CATCGCTCGA AACCACCATC AACGGCGCGT TCGACGCGCG CGAGACCATC
ACCCCCGCGA CAAGGGGCGA AGTGCGCGAT GCCGTCGATC AGGCGCTCGG CCTGCTCGAC
AAGGGCGAGG CGCGCGTCGC CGAGCGCGCG GCCGACGGCA AGTGGCAGGT CAATCAGTGG
CTGAAGAAGG CCGTGCTGCT CTCGTTCCGC CTCAACGACA TGAGCGTCAT CCCCGGCGGT
CCCGGCAACG CCGCGTGGTG GGACAAGGTG CCGTCGAAGT TCGAGGGCTG GGACGAGAAC
AGATTTCGTG ACGCCGGCTT TCGCGCCGTG CCGGGCGCGA TCGTGCGCCG CTCCGCCTTC
ATCGCAAGGA ACGTCGTGTT GATGCCGTCG TTCGTCAATC TTGGCGCTTA TGTCGACGAG
AGCACCATGG TCGACACCTG GTGCACGGTG GGCTCCTGTG CCCAGATCGG CAAGCGGGTC
CACATCTCCG GCGGCGCGGG CATCGGCGGC GTATTGGAGC CGCTGCAAGC CGGGCCCGTG
ATCATTGAGG ACGATTGCTT CATCGGCGCG CGCTCGGAAG TGGCGGAGGG TGTGATCGTG
CGCAAGGGGG CGGTGCTGTC GATGGGCGTT TTCCTCGGCG CTTCGACCAA GATCGTCGAT
CGCACGACCG GCGAGATCTT CATGGGCGAA GTGCCGGAAT ACGCGGTGGT GGTGCCGGGC
GCGCTGCCGG GCAAGCCGCT GAGCAACGGC CAGCTCGGTC CGTCCACCGC CTGCGCGGTC
ATCGTCAAGC GCGTCGACGA ACGCACGCGC TCCAAGACCG GGATCAACGA ACTACTGAGG
GACTGA
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| Protein sequence | MPTASLETTI NGAFDARETI TPATRGEVRD AVDQALGLLD KGEARVAERA ADGKWQVNQW
LKKAVLLSFR LNDMSVIPGG PGNAAWWDKV PSKFEGWDEN RFRDAGFRAV PGAIVRRSAF
IARNVVLMPS FVNLGAYVDE STMVDTWCTV GSCAQIGKRV HISGGAGIGG VLEPLQAGPV
IIEDDCFIGA RSEVAEGVIV RKGAVLSMGV FLGASTKIVD RTTGEIFMGE VPEYAVVVPG
ALPGKPLSNG QLGPSTACAV IVKRVDERTR SKTGINELLR D
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