| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_3066 |
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| Symbol | truA |
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| ID | 3674530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 3331557 |
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| End bp | 3332324 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637714631 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_319666 |
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| Protein GI | 75677245 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.301608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.564584 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCCGCT ACAAGCTCAC CATCGAGTAT GACGGTGGTC CCTTCTGCGG CTGGCAGTAC
CAGACCAACG GGCCGTCGGT GCAGGGCGCG CTGGAAGCGG CGGTCAAGGC GATTTGCGGT
GATGACGTCC GCGTGCACGG CGCGGGCCGC ACGGATGCCG GCGTTCATGC GCTGGCGCAG
GTGGCGCATT GCGATATCGC CAGGCATTTC ATGCCGGACC GGCTGCGCGA CGGACTCAAC
GCTCATCTGC GGCCGCATCC AATCGGCGTG CTCGAAGCCG AGATCGTGCC AGACAGCTTC
GAGGCGCGCT TTTCGGCACG CAGGCGACAT TACATTTATC GCATCGCCAA TCGCCGCGCC
AATCTCGCCA TCGATGTGGG GCGGGTCTGG CGCGTGCCCC GGCCGCTCGA TACCGAAGCG
ATGCACGCTG CCGCGCAACG GCTGCTCGGC AAGCACGATT TCACGACCTT TCGCGACACC
GAATGTCAGG CCAAATCGCC GGAAAAAACG CTCGATCAGC TCGACGTGAT CAGGAACGGC
GACAATGTCA GCATCATCAC TTCGGCGCGC TCCTACCTGC ACAGCCAGGT GCGCTCCATG
GTGGGTTCGT TGGTGTGGGT CGGGCATGGC CGCTGGAATG CCGACGATCT GTCCGGCGCG
CTGGCGGCGC GGCGGCGCGA AGCCTGCGGG CCGGTGGCGC CACCCGACGG ATTGTACCTC
GCGCGGGTCG ATTACGAGGG GAGTATCCCC CTCAGGCAAG ATCGATGA
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| Protein sequence | MPRYKLTIEY DGGPFCGWQY QTNGPSVQGA LEAAVKAICG DDVRVHGAGR TDAGVHALAQ
VAHCDIARHF MPDRLRDGLN AHLRPHPIGV LEAEIVPDSF EARFSARRRH YIYRIANRRA
NLAIDVGRVW RVPRPLDTEA MHAAAQRLLG KHDFTTFRDT ECQAKSPEKT LDQLDVIRNG
DNVSIITSAR SYLHSQVRSM VGSLVWVGHG RWNADDLSGA LAARRREACG PVAPPDGLYL
ARVDYEGSIP LRQDR
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