Gene Nwi_3065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_3065 
Symbolfmt 
ID3674529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp3330613 
End bp3331557 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content67% 
IMG OID637714630 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_319665 
Protein GI75677244 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.38579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.372111 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTTC GCCTGATCTT CATGGGCACG CCCGATTTCG CGGTGCCGAC CCTGCAGCAA 
CTCGTAGCCC ACGGCCACGA GATCGCGGCC GTCTACACCC GCGAGGCAAG ACCCGCCGGC
CGCGGCATGA AGCTGCAGCC GACACCCGTG GCGCGGGAAG CGCAGCGGCT CGGCCTCCCC
GTGCTGACGC CGAAAACGCT GAAGACGCAG GAATCGCAGG ACCAGCTTCG TTCGTACGGA
GCCGATGCCG CGGTCGTCGT CGCCTACGGT CTGATCCTGC CGCAGGCGAT CCTCGATGCC
CCGCGATACG GCTGCTACAA TCTGCACGCA TCGCTGCTGC CGCGCTGGCG CGGCGCCGCG
CCGATCAACC GCGCCGTCAT GGCCGGCGAC GCTGAAAGCG GCGTCATGGT CATGAAGATA
GATGCCGGCC TCGACACCGG CGACGTCGCC ATGGCCGAGC GGGTCCCCAT TACCGATGCG
ATGACGGCCT CCGATCTACA TGACACGCTG GCGCCGCTGG GGGCTGATCT GATGGCGCGG
GCGATGGACG CGCTGGAGCG CGGCGAGTTG CGCCTGACGA AGCAAAGCGA ACAAGGCGTC
GCCTCTACCG TCACCTACGC CGCCAAGATC GACAAGGCCG AAGCGCACAT CGTTTGGAGC
AACCCTGCGC GCGAGGTGCT GCGCCACATT CATGGCCTGT CACCGTTTCC GGGCGCCTGG
TGCGAGATGC CGGTCGATGG CGAGGCGGTA CGCATCAAGA TCCTGCGATG CGAGCTGGCG
GAAGGCGCGG GATCACCGGG AGACCTTCTC GACGATCGCC TGACCATTGC GTGCAAGGAT
GGCGCGATCC GCGTTCTCGA ATTGCAGCGC GCGGGAAAGC CGCCGATGAA GGCCGCCGCT
TTCCTGAACG GCACGCCGCT GACGCCGCCG CTGCGGCTCG ACTGA
 
Protein sequence
MPLRLIFMGT PDFAVPTLQQ LVAHGHEIAA VYTREARPAG RGMKLQPTPV AREAQRLGLP 
VLTPKTLKTQ ESQDQLRSYG ADAAVVVAYG LILPQAILDA PRYGCYNLHA SLLPRWRGAA
PINRAVMAGD AESGVMVMKI DAGLDTGDVA MAERVPITDA MTASDLHDTL APLGADLMAR
AMDALERGEL RLTKQSEQGV ASTVTYAAKI DKAEAHIVWS NPAREVLRHI HGLSPFPGAW
CEMPVDGEAV RIKILRCELA EGAGSPGDLL DDRLTIACKD GAIRVLELQR AGKPPMKAAA
FLNGTPLTPP LRLD