Gene Nwi_3054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_3054 
Symbol 
ID3676363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp3317185 
End bp3317385 
Gene Length201 bp 
Protein Length66 aa 
Translation table11 
GC content52% 
IMG OID637714620 
Productcold-shock protein, DNA-binding 
Protein accessionYP_319655 
Protein GI75677234 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0480379 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGG GTACTGTGAA GTGGTTCAAC CCGACCAAAG GTTATGGTTT CATCCAGCCT 
GCCGGAGGCG GCAAGGATGT GTTCGTCCAT ATTTCAGCCG TCGAAAGAGC AGGTCTTTCA
ACGCTGAATG AAGGCCAGAC CGTTGAATTC GAGGAAGTTG CCAACCGGGG AAAGACGTCG
GCCGAAAACC TGAAGGTTTG A
 
Protein sequence
MAKGTVKWFN PTKGYGFIQP AGGGKDVFVH ISAVERAGLS TLNEGQTVEF EEVANRGKTS 
AENLKV