Gene Nwi_3049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_3049 
Symbol 
ID3676358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp3310303 
End bp3311085 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content66% 
IMG OID637714615 
ProductABC transporter, ATPase subunit 
Protein accessionYP_319650 
Protein GI75677229 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGG ACGCTGTTCT CGTCGCGTCG TCGCTGTCCG TGCATCTCGG AAAGAGGCTT 
GTCCTGAGCG ACATTTCGCT GACGCTGCCG GGCAGGCGCC TTGTCGCGCT GGTGGGACCG
AACGGCGCCG GCAAGACCAC GTTGCTCCGG GCGCTGGCGG GACTGCTGCC GTCCGAAGGC
AGGATCGAGA TCCGCGGCGA CGCGCTTTCA TCCCTCAGCC TTCAAGAACG CGCTCGCCGT
TTCGCCTATC TGCCGCAGGG TCACCAGGTG CATTGGCCGT TGCCGGCCAG GGATGTGGTG
GCGCTCGGGC GTTACCCGCA CGGCGCATAC GATCCCGGAA GGCTGACCGG CCACGACGCC
GACGCCGTGG CGCGGGCGAT GCAAATGGCC GACGTGCTAA ATCTGAGCGA TCGCCGCGTG
ACGGAATTGT CGGGCGGCGA GCGCAGCCGG GTCGCGCTGG CGCGGGTGCT GGCGGTGGAA
GCGCCGGTGC TTCTGGCCGA CGAGCCGACC GCATCGCTCG ATCCGCGTTA TCAGATCGAG
GTCCTTATCA AGCTGCGGGC AACGGCCGAC AACGGAACGC TGGTTATCGT GGTGACGCAT
GATCTCGGAC TGGCGGCACG TTTCGCCGAT ACTGTTCTGG TGATGTCGGA GGGACGTCTG
GTGTCGCAGG GACCGCCCGC CAGCGCGCTG TCGGAAGCAA TCATGGCCGA GGTCTTTCGC
ATCAGAACCT ATCGTGCCGA CCATGAACAC GAAATCGTTC TGGTGCCGTG GGCGGAGGCG
TAA
 
Protein sequence
MSEDAVLVAS SLSVHLGKRL VLSDISLTLP GRRLVALVGP NGAGKTTLLR ALAGLLPSEG 
RIEIRGDALS SLSLQERARR FAYLPQGHQV HWPLPARDVV ALGRYPHGAY DPGRLTGHDA
DAVARAMQMA DVLNLSDRRV TELSGGERSR VALARVLAVE APVLLADEPT ASLDPRYQIE
VLIKLRATAD NGTLVIVVTH DLGLAARFAD TVLVMSEGRL VSQGPPASAL SEAIMAEVFR
IRTYRADHEH EIVLVPWAEA