Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_3045 |
Symbol | |
ID | 3676354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | - |
Start bp | 3303193 |
End bp | 3303741 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637714612 |
Product | fec I like protein |
Protein accession | YP_319647 |
Protein GI | 75677226 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.688858 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGCGC GAAACCTGCG CGATCGAGGG GACAAGGCTC GGCCCGTGAC GTTCGATGTC CATGATCTTT TCCGGCGACA CAGCAAGGAG CTGACCCGTT TCCTGCGCCG GCGCGTGCCG TCCGCGGACG TTGCCGCGGA TCTGACCCAG GAAGCGTTTC TCGCGCTCTG GGCGGCGCGA TCCCGCACAT CCATCGCCGA TGGTCATGCC TATCTGTTTC GCACGGCGAC CAATCTGGCG ATCAACCACA ATCGCCGCCA GCGCATCCTG TCTTTTGTCG ATGACCCGGA CACCGCGCTT GCGACGCTCG CGGACGAAAC TCCGTCGGCC GAGCAGGTTC TGTTGTCCCG GCAGGAACTG ATGATCGTTT ACGCGACGCT GAAGGAATTC CCGCCGGCCC ATCGCGCGGT TTTCATTCTG TCACGCATCG ACGGCAGGAC GTTCGCTGAG ATTGGCCGGA TGCTCGACAT CCAGCCCAGG ACGGCGTTTG GTCATATGGT GCGCATCCTC GCCCGGATGA AACTGCGGCT CGATGAGGCG CGGCGTTAA
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Protein sequence | MIARNLRDRG DKARPVTFDV HDLFRRHSKE LTRFLRRRVP SADVAADLTQ EAFLALWAAR SRTSIADGHA YLFRTATNLA INHNRRQRIL SFVDDPDTAL ATLADETPSA EQVLLSRQEL MIVYATLKEF PPAHRAVFIL SRIDGRTFAE IGRMLDIQPR TAFGHMVRIL ARMKLRLDEA RR
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