Gene Nwi_3045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_3045 
Symbol 
ID3676354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp3303193 
End bp3303741 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content63% 
IMG OID637714612 
Productfec I like protein 
Protein accessionYP_319647 
Protein GI75677226 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.688858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCGC GAAACCTGCG CGATCGAGGG GACAAGGCTC GGCCCGTGAC GTTCGATGTC 
CATGATCTTT TCCGGCGACA CAGCAAGGAG CTGACCCGTT TCCTGCGCCG GCGCGTGCCG
TCCGCGGACG TTGCCGCGGA TCTGACCCAG GAAGCGTTTC TCGCGCTCTG GGCGGCGCGA
TCCCGCACAT CCATCGCCGA TGGTCATGCC TATCTGTTTC GCACGGCGAC CAATCTGGCG
ATCAACCACA ATCGCCGCCA GCGCATCCTG TCTTTTGTCG ATGACCCGGA CACCGCGCTT
GCGACGCTCG CGGACGAAAC TCCGTCGGCC GAGCAGGTTC TGTTGTCCCG GCAGGAACTG
ATGATCGTTT ACGCGACGCT GAAGGAATTC CCGCCGGCCC ATCGCGCGGT TTTCATTCTG
TCACGCATCG ACGGCAGGAC GTTCGCTGAG ATTGGCCGGA TGCTCGACAT CCAGCCCAGG
ACGGCGTTTG GTCATATGGT GCGCATCCTC GCCCGGATGA AACTGCGGCT CGATGAGGCG
CGGCGTTAA
 
Protein sequence
MIARNLRDRG DKARPVTFDV HDLFRRHSKE LTRFLRRRVP SADVAADLTQ EAFLALWAAR 
SRTSIADGHA YLFRTATNLA INHNRRQRIL SFVDDPDTAL ATLADETPSA EQVLLSRQEL
MIVYATLKEF PPAHRAVFIL SRIDGRTFAE IGRMLDIQPR TAFGHMVRIL ARMKLRLDEA
RR