Gene Nwi_3033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_3033 
Symbol 
ID3676403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp3286399 
End bp3288348 
Gene Length1950 bp 
Protein Length649 aa 
Translation table11 
GC content66% 
IMG OID637714600 
Producthypothetical protein 
Protein accessionYP_319635 
Protein GI75677214 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2982] Uncharacterized protein involved in outer membrane biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0689945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAG CATTGAAAAT CGTGAGCGCC GTCGCAGCCA GCCTGGTCGC GGTCGTCCTC 
ATGCTTCTCG TCACCGGAAT CCCTTCCCGT TTCGTCACGT CGCTGGTGCA GGACCGGATC
GAGCGCGACA CCGGGTACCG GATTGCGATC AACGGCACGA CCGGAATTGA GCTATGGCCC
TCGCCCGGAT TCGCGCTGCA CCATGTGACG TTTGATCGTC CGGGGAGCGC CGCCACGGAT
GCTCAACTCG CCGTGGGGGA AGTCCGCGCG ACGCTCGAGC TTGCGGGCCT GCTGTCGGGG
ACCTTGAAGA TCTCGGAATT GACCATCGAC CACCCCACGC TGCGGGCGCC GCTGCTTCGT
GAACGCACCG GCGGTGGCGT GCCGTCCCGG CCGGATCGCT CCGAGGAGAC AGCGGGAGAC
GATACGGCGT TCCCGATCGG AAGGGTGACG GTTTCCAACG GCGCGATCGT TTTCTTCGAT
CCGCAAACCG GGTGGGAGGA CCGCATCGAT GACGTGAACG CCAGCGTGAG GCTTGGCGCC
GACCGGCGAA TCAACATCAC GGGCGACGCG CGTCCCGGCG GCCGATCGCT GACATTCGCC
ATCGCTGCGA CCCCTCCCGC GGGTCCGCTC GGACGCCGGA ATATCCCGAC CGAGCTGACG
CTTGAAGTTT CGGGCGCGCC GACCCGTCAA CTGACCGCCA GGGCCGAGGT TCGGATCAAC
AGGCAGACGC TTCTTATCAA TGGCCTGTCC GGATCGCTCG ACGACGGCAA GTTCAACGGC
TGGGCGTCGG TCGATCTTGC GAGCAAGCCG CTGGTGAAGG TCGATCTCGA TTTTCAGAAG
CTCGACCTGA GCGCAGCACC AAGCGAAGCT TCCGCGCCAC GCTCGGGCGC GCAGCCCTCC
AGCGAGCAGT CATGGAGCGA CGCGCCGATC GATGTCGGCG GGCTCAACTA TGTCGACGCG
CAGGGGACGA TTTCAGCCGC GGAACTGACG ATCGGCGGGG CGCGCTTCGC GCCGGCCCAG
GTCGAGGCCG CCCTCGCCAG AGGCGTCTTG AAGGCTTCCT TTCCGAACCT CGGCGTCTAT
GACGGGCGAG CCAATGGCAG CCTGTCGATC GACACGTCCA CCGGCGACAG CCCTTCCTAC
GCGCTCAAGG CCGAGGTGAC CGGTGTTCGC GCGCTGCCGC TGTTGTCGAG TCTCGCCGGT
TTCGACAATG TCGACGGCAG GATGCGGGCG ACAGCCGATG TCCGGGGCGC GGGCGCCAGC
TTGCGCGCGG TCATGTCGAG CCTTGCGGGA ACAGCTTCGA TCGACGTCCG CGACGGGGCG
ATCCGCAATC TCAATATCGC GAAAATGATC CGCGCGTTGA CGTCCGGCAC CCTGTCGGGA
TGGCAGGAGC GTCCTGACCA GACCACCGAC CTGTCGCAAC TCAGCGCCAC CGCGACCATC
GTTAAAGGGC AAGCGACCAC GAATGATCTG TATCTCGCCG GTCCGCTTGT GCGGATGACC
GGCGCGGGCT CCGTCGATCT CGGCGCGAAG ATGCTGGCGC TCCGGGTCGA GCCGAAGCTC
GTCATGACAA CCGAGGGCCA GGGAGGGCGC GCCGACCCGA TCGGCCTTGG CATTCCGGTC
GTCGTGCAGG GATCATGGAG CGAGCCGCGC ATCTATCCTG ATGTCGCGGG CATCCTCGAT
GACCCCGGCG CGGCCTATGC CAAGCTCAGG GAATGGGGAC AGGGATTGTT CGGCAGCAGC
GGGACCGGCA ACTCCGGCAC GTCCGTCCCC CATATCGGAG AGACCCTTGA TACCTTGATC
CGGCAAGGTC TCGGCGCGGG AGCCTATCCC GCTCCCGCGG AATCGCCTGC CGCGGGCAAG
CCTCCTGAAG GACCGCCACG CCGGGAGGCG CCGTCCCCGG ACAAGCCGCC GCCCATCGAC
GAGATCATGA AGCAGATGTT CGGGCGTTAG
 
Protein sequence
MAKALKIVSA VAASLVAVVL MLLVTGIPSR FVTSLVQDRI ERDTGYRIAI NGTTGIELWP 
SPGFALHHVT FDRPGSAATD AQLAVGEVRA TLELAGLLSG TLKISELTID HPTLRAPLLR
ERTGGGVPSR PDRSEETAGD DTAFPIGRVT VSNGAIVFFD PQTGWEDRID DVNASVRLGA
DRRINITGDA RPGGRSLTFA IAATPPAGPL GRRNIPTELT LEVSGAPTRQ LTARAEVRIN
RQTLLINGLS GSLDDGKFNG WASVDLASKP LVKVDLDFQK LDLSAAPSEA SAPRSGAQPS
SEQSWSDAPI DVGGLNYVDA QGTISAAELT IGGARFAPAQ VEAALARGVL KASFPNLGVY
DGRANGSLSI DTSTGDSPSY ALKAEVTGVR ALPLLSSLAG FDNVDGRMRA TADVRGAGAS
LRAVMSSLAG TASIDVRDGA IRNLNIAKMI RALTSGTLSG WQERPDQTTD LSQLSATATI
VKGQATTNDL YLAGPLVRMT GAGSVDLGAK MLALRVEPKL VMTTEGQGGR ADPIGLGIPV
VVQGSWSEPR IYPDVAGILD DPGAAYAKLR EWGQGLFGSS GTGNSGTSVP HIGETLDTLI
RQGLGAGAYP APAESPAAGK PPEGPPRREA PSPDKPPPID EIMKQMFGR