Gene Nwi_3020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_3020 
Symbol 
ID3676390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp3267173 
End bp3268219 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content69% 
IMG OID637714587 
Producthypothetical protein 
Protein accessionYP_319622 
Protein GI75677201 
COG category[S] Function unknown 
COG ID[COG3768] Predicted membrane protein 
TIGRFAM ID[TIGR01620] conserved hypothetical protein, TIGR01620 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGC GTACCGGCCA GCGCCGTCCC GTCACCTTCA AGCTCGACGA TCCGCACGTC 
GTGGTCCTGG AACGCGACGA GGCCGCTGCC CGGCCCGCTC GCGGCAGCAT CAGCATCACG
CCGGAAGCGG AACCCGAGCC GGAGCCGGTG CTGCTGCCGG AATCGCCGGA TACGCCTCCG
GTGCCGGCGC GGAAGGGATT TCGCTGGGGG GTGCTGTTCT GGTCGTCGCT GGCCGGGCTC
ATCCTGCTCG GCACCGTCCT CGGCGCGATC AACTTGATCG GGGACCTGTT CGCGCGCAGC
GAAGGACTTG GTTTTCTCGG GCTGACGCTG GCGGCGCTGT TCGTCGTGGC ATCGATCGTC
ATCGCGGCAC GCGAGATTCT TGGCCTTGCC CGTCTCGCCA CCATCGAGAA CCTGCACCGG
CGCGCGCTGG CCGCGATCGC GGCTGACGAT CGCAAGGAGG CGGATGCGGT GGTGCGCGAT
CTGGTGAAGC TCGCCCACAA CGATCCGCAT CTGGCGCGGG CGCGGGCCAC GTTGCGGAGC
CACAGCACCG ACATCATCGA CGGCGCCGAT CTGGTGCGGC TGGCGGAGCG CGAACTGATG
GCTCCGCTGG ATCAGGAGGC CCGCCGGCTG GTGTCGGTGG CGGCGCAGCG CGTGTCGATC
GTCACCGCGA TCAGCCCCCG CGCCGTCGTG GACGTGCTGT TCGTATTCGC CGCCGCGATG
CGGCTGGTGC GGCAGCTCGC GCGCCTCTAT GGCGGAAGGC CGGGCACGCT CGGGATGATC
CGGCTGATGC GCCACGTCAT CGCGCATCTC GCGATCACCG GCGGCATCGC GGCCAGTGAC
ACGCTGATCC AGCAGATGGT CGGTCAGGGC ATCGCCGCGA AACTGTCGAC GCGTCTGGGC
GAAGGCGTGC TCAACGGATT GCTGACCGCC CGTCTCGGGC TTGCGGCGAT CGACGTCACC
CGGCCGATGC CGTTCACGGC GCTGCCACGT CCCGCGCTCG GCGATCTGGT CAAAGATCTG
TTGCGCAAGC GCGACGGCGG CAATTGA
 
Protein sequence
MSERTGQRRP VTFKLDDPHV VVLERDEAAA RPARGSISIT PEAEPEPEPV LLPESPDTPP 
VPARKGFRWG VLFWSSLAGL ILLGTVLGAI NLIGDLFARS EGLGFLGLTL AALFVVASIV
IAAREILGLA RLATIENLHR RALAAIAADD RKEADAVVRD LVKLAHNDPH LARARATLRS
HSTDIIDGAD LVRLAERELM APLDQEARRL VSVAAQRVSI VTAISPRAVV DVLFVFAAAM
RLVRQLARLY GGRPGTLGMI RLMRHVIAHL AITGGIAASD TLIQQMVGQG IAAKLSTRLG
EGVLNGLLTA RLGLAAIDVT RPMPFTALPR PALGDLVKDL LRKRDGGN