Gene Nwi_3008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_3008 
Symbol 
ID3675035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp3256321 
End bp3256962 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content59% 
IMG OID637714574 
ProductISRm2011-2 transposase protein 
Protein accessionYP_319610 
Protein GI75677189 
COG category[L] Replication, recombination and repair 
COG ID[COG3335] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGAGTTC GTTCACGCTG TGAAGCTCAG TTACAAAAAA AGACGCTGAT TGCTGCAGAG 
CAGGATCGTC CCGATGTCGC CCGTCGGCGA GCGCAATGGA CCAAGTATCG AGATCGGATT
GATCCCACTC GGCTGGTGTT CATCGATGAG ACCTGGACCA AAACCAATAT GGCGCCGCTG
CGGGGCTGGG CGCCGCGCGG TCAACGCATC AGAGCCAAGG TGCCGCATGG CCGCTGGCAG
ACCATGACCT TTATGGCCGC TCTGCGCCAC GATCGCATCA CCGCGCCGTG GTTCATCGAG
GGGCCGATCA ACGGCGAAGC CTTCCTTCTC TACATCGAGA AGGTTCTGGT CCCGACCCTG
CGGCACGGCG ACATCGTCAT TATGGACAAC CTCGGCTCGC ACAAGGCCAG CGCCGTGCGT
CGCGTCATCC GTGCCGCCGG TGCCCGGCTC TTCTACCTGC CGAAATACTC GCCTGATCTG
AACCCGATCG AGCAGTTCTT TGCCAAGTTC AAACACTGGC TACGCAAAGC CACGCAGCGG
ACCACCGAGG CCGTCTACAA TGCTATCCCT CCGATCCTCG AAACCGTTGC ACCGGCTGAA
TGCGCCAACT ACTTCGTCAA TGCAGGATAC AACCAAATCT AA
 
Protein sequence
MGVRSRCEAQ LQKKTLIAAE QDRPDVARRR AQWTKYRDRI DPTRLVFIDE TWTKTNMAPL 
RGWAPRGQRI RAKVPHGRWQ TMTFMAALRH DRITAPWFIE GPINGEAFLL YIEKVLVPTL
RHGDIVIMDN LGSHKASAVR RVIRAAGARL FYLPKYSPDL NPIEQFFAKF KHWLRKATQR
TTEAVYNAIP PILETVAPAE CANYFVNAGY NQI