Gene Nwi_3000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_3000 
Symbol 
ID3675027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp3246425 
End bp3247741 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content68% 
IMG OID637714566 
Producthypothetical protein 
Protein accessionYP_319602 
Protein GI75677181 
COG category[S] Function unknown 
COG ID[COG4949] Uncharacterized membrane-anchored protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.154427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGG AAGTCTCGAT TGGGGACGCG GAGGCCGCCC GGCTTGCTCC GCACCCGCTC 
CGCAACGCGA TTCTGGGCGA ACTCCACGCG CGGCCCTTCA CGGCGCTGAC CGTCCCGGCC
CGGATCCTGC ATTTCGCGTT CGATACCGCC GGCGAGCGCG GGCACGCCGA CCGCGTCAAC
CTCGCGAAAT TCTGCGCGGC GCGCGGCCTT CCCGTGCCGA CCTTCTCCGA ACGACACTAT
CGCGTCGCCT TCGGCACCAC CGCGCTACGG TGGGAGCAGC ACTCCGAGTT CACGACCTAC
ACCTGGGAGC TGCCCTCTCC CGCCAATGGC ATTCCGTTTC ATCCACCCGC CGCCGCGCTG
GCAACCCCGA TGCAGCTCGT GCCGCAGCCC GGGCCGCTGC TCGTCGCCAT CGATATGCAT
GTGCTCGCCG ACGGGCCCGC CGTCCAGCCA CCGGAGCGGC TGTTCGAGCG AACCAGCCTT
GCGCTCGCCG AAAACAATGA CGGCGCGGCG ATCTACGCCA CGGACTTCCA GCCCGATCCG
TCCGGCTTCG TGCGAATCCT GGTGGTCGAC CGCAAGCTCA ATCCCGACCG CGCCGGCGCG
CTGGCCCAGC GCGTGATCGA GATCGAGACT TACCGCACGC TCGCCTTGCT CGGCCTGCCC
GAAGCGCAGC GCCTCGCGCC TTCGATCAGC GCCGTCGAGC AGCGCCTCGC CGAAGTGACC
GACAAGATGC GCAATAACGG CAATCTCGCG GACAATCGCC ACCTGCTCGA TGAACTCACG
GCGCTGGCCG CCGAGGTCGA GGCCGGCGCC GCGGCGAGCG TCTTCCGCTT CGGCGCCAGC
CGCGCCTATT ATGAGATCGT GCAGCAGCGG CTGGCCACCG TCGGCGAGCG CAAGGTCGCC
GGACTGCCGA CGTGGACCTC GTTCCTGGCG CGCCGGATGG CGCCGGCGAT GCGGACCTGC
GTCACCACCG AGGCCCGCCA GGAGAGCCTC TCGCTCAAGC TCTCGCGCAC CGCCAACCTG
CTGCGCACAC GCGTCGACGT CGAACTCGAG CAGCAGAACC AGGAGCTCCT GAAATCGATG
AACGCCCGCA CTCGGATGCA GCTCCGGCTG CAAACCACGG TCGAGGGGCT GTCGGTCGCG
GCGATCACCT ATTATGTCGT CAGCCTGTTC GGCTATATCG CCAAGGCGCT GCACGAGTCC
GGAACGCTCG CGATCAAGCC GGGCCATCTG ACCGCGGCCT TCATTCCGGT GGCGGCGTTC
ACGATCTGGT CGATCGTACG CCGCATTCGC CACAAGCACA TCGGCCACGA CGGCTGA
 
Protein sequence
MSAEVSIGDA EAARLAPHPL RNAILGELHA RPFTALTVPA RILHFAFDTA GERGHADRVN 
LAKFCAARGL PVPTFSERHY RVAFGTTALR WEQHSEFTTY TWELPSPANG IPFHPPAAAL
ATPMQLVPQP GPLLVAIDMH VLADGPAVQP PERLFERTSL ALAENNDGAA IYATDFQPDP
SGFVRILVVD RKLNPDRAGA LAQRVIEIET YRTLALLGLP EAQRLAPSIS AVEQRLAEVT
DKMRNNGNLA DNRHLLDELT ALAAEVEAGA AASVFRFGAS RAYYEIVQQR LATVGERKVA
GLPTWTSFLA RRMAPAMRTC VTTEARQESL SLKLSRTANL LRTRVDVELE QQNQELLKSM
NARTRMQLRL QTTVEGLSVA AITYYVVSLF GYIAKALHES GTLAIKPGHL TAAFIPVAAF
TIWSIVRRIR HKHIGHDG