Gene Nwi_2990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2990 
SymbolglpD 
ID3675374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp3233767 
End bp3235341 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content65% 
IMG OID637714556 
Productglycerol-3-phosphate dehydrogenase 
Protein accessionYP_319592 
Protein GI75677171 
COG category[C] Energy production and conversion 
COG ID[COG0578] Glycerol-3-phosphate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTTT CATATAAGAT GATGGAGGAG GGTGCGCCCG TGGGTCAGGT TTACGACCTC 
GCTATCATCG GCGGCGGCAT CAACGGCTGC GGGATCGCGC GCGACGCGGC CGGGCGTGGC
AACTCGGTCT TCCTGTGTGA AATGAACGAC CTCGCGAGTG GCACCTCGTC AGGATCGACC
AAGCTGGTGC ATGGCGGACT GCGTTATCTG GAATATTACG AGTTCCGCCT GGTTCGCGAA
GCCCTGATCG AGCGCGAGAT CCTCTGGCGG ATCGCGCCTC ACATCATTCA TCCGGCGCGC
TTCGTGCTGC CGCATCACGC CGGCCTGAGG CCGGCATGGC TGCTGCGGTT CGGCCTCTTC
CTTTACGATC ATATCGGAGG CCGAAAGCTG TTGCCACCGA CGCGCTCGGT TGACCTTGCG
CGCGATCGGG TCGGAAAGCC GCTGAGTCCG GGCCGCTACC ATAAGGGTTT CGAATATTCC
GACTGCGTGG TCGACGATGC CCGTCTCGTC ATTCTGACAG CGCGCGATGC GGCCGATCGC
GGAGCCGATA TCCGGACCCG GACGCGCGCG GTCGAGACCC GTCCGTCCGA CGGCTTCTGG
CGCGTCACGG TCGAGGATAC ACGAAGCGGC GAACGCAGCA CGATCGCCGC GCGAGTGCTG
GTCAACGCGG GCGGGCCCTG GATCGAACAG GTGCTGCGGC TGGGCGCCGG CGTCAACAGC
CGCGCGCGGG TGCGGCTGGT GCAGGGGTCG CATATCGTGG TCGGCAAGCT CTACGATCAC
GACCGCGCCT ACATCTTCCA GAACAGCGAC GGCCGGATCG TGTTCGCCAT TCCCTATCAG
GATGACTTCA CCCTGATCGG GACCACGGAT CGCGACTATG AGGGGGACCC CGCCAGGGTG
AAGGCGTCGG ATGAGGAAAT CGCCTATCTC TGCGCCTCGG TCAGCGAGTA TCTGGCGAAA
CAGGTCGCGC CGCGGGATGT CGTTTGGTCC TATGCCGGGG TGCGGCCTCT CTATGATGAC
GGCGCGAGCG AGGCCAAGGC CGCTACCCGT GAATACGCTT TTGAACTCGA TACGCCTGAA
GGCGCGCCGC TGCTGTCGGT CTATGGCGGC AAGATCACGA CCTATCGCCG GCTTGCCGAA
GAGGCGCTGG AAAAGCTGTC ACCCTATCTG AAGGGGACAA AGGCGCGCGA GGGCTGGACG
TCGAAGGCGG CGCTGCCCGG CGGAGACATG GAGGTCTCCG CGGTTGAGGG GATCCCGGCC
GATCTAATGC GAGGCTATCC TTTTCTGACG CTGGCGCACG CGCGCCGTCT TGCGCGCGCA
TATGGCTCCC GCGCCGCCGC GATGCTGGGG ACGGCGAAAA CGATGGCGGA TCTGGGCCGC
GAATTCGGGG CCACGCTCAC GGAACGCGAG GTCCGCTATC TCATGACCAA CGAATGGGCT
TGCACCGCGG AGGATGTTAT CTGGCGACGC TCCAAGCTTG GCTTGCGGAT GTCGGTGGCA
GACGTCGCCG CGCTTGAGAC CTGGTTCGCG GAGCAGACGG AGGGACGCTT GAGGGAGGCG
GAAGCGCGCC CATGA
 
Protein sequence
MTLSYKMMEE GAPVGQVYDL AIIGGGINGC GIARDAAGRG NSVFLCEMND LASGTSSGST 
KLVHGGLRYL EYYEFRLVRE ALIEREILWR IAPHIIHPAR FVLPHHAGLR PAWLLRFGLF
LYDHIGGRKL LPPTRSVDLA RDRVGKPLSP GRYHKGFEYS DCVVDDARLV ILTARDAADR
GADIRTRTRA VETRPSDGFW RVTVEDTRSG ERSTIAARVL VNAGGPWIEQ VLRLGAGVNS
RARVRLVQGS HIVVGKLYDH DRAYIFQNSD GRIVFAIPYQ DDFTLIGTTD RDYEGDPARV
KASDEEIAYL CASVSEYLAK QVAPRDVVWS YAGVRPLYDD GASEAKAATR EYAFELDTPE
GAPLLSVYGG KITTYRRLAE EALEKLSPYL KGTKAREGWT SKAALPGGDM EVSAVEGIPA
DLMRGYPFLT LAHARRLARA YGSRAAAMLG TAKTMADLGR EFGATLTERE VRYLMTNEWA
CTAEDVIWRR SKLGLRMSVA DVAALETWFA EQTEGRLREA EARP