Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_2985 |
Symbol | |
ID | 3675369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | - |
Start bp | 3227976 |
End bp | 3229283 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637714551 |
Product | isocitrate lyase |
Protein accession | YP_319587 |
Protein GI | 75677166 |
COG category | [C] Energy production and conversion |
COG ID | [COG2224] Isocitrate lyase |
TIGRFAM ID | [TIGR01346] isocitrate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.54257 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGGA CCTTTGAGCA GATCGTTCTC GCCCCCAAGG GGCGGTTTGA GGGGATCAGC CGTCCCTATG CTCCGGAGGA CGTCGAACGG CTGCGCGGCT CGGTCCAGAT CGAGCATACC CTGGCGGAGA GGGGCGCGAA CCGGCTTTGG AAGCAACTCA ACGAAATGCC TTATGTGAAT TCGCTCGGCG CCGTCACCGG CAATCAGGCG ATGCAGCAGG CGCGCGCCGG TTTGCCCGCC ATCTATCTCT CCGGCTGGCA GGTCGCCGCC GACGCCAACA CCGCGGGCGC GATGTATCCG GATCAGAGCC TCTATCCGGC TAACGCCGGT CCTGAACTCT GTCGCCGCAT CAACCGCACC TTCCAGCGCG CCGACCAGAT CGAGCACGCC GAGGGTGGGG CGAAGATCGA CTGGTTCGTA CCTATCGTCG CCGACGCCGA AGCGGGTTTC GGCGGGCCGC TCAACGCGTT CGAGATCATG AAAGCCTATA TCGAGGCGGG CGCGGCCGGC GTCCACTTCG AGGACCAGCT CGCATCGGAA AAGAAGTGCG GGCACTTGGG CGGCAAGGTG CTGATCCCGA CCGCGGAGCA TGAGCGCAAT CTGATCGCGG CGCGGCTTGC GGCCGACGTC TGCGGGGTGC CGACTCTCGT GCTGGCGCGC ACCGATGCGG AGAGCGCGAA GCTGATCACG TCGGACATTG ACGAGCGCGA TCACGAGTTC ATCACCGGCG AACGCACGGC GGAAGGCTTC TATCGCCTGA AGCCTGGCAC CGGCCTTGAC CATTGCATCA AGCGCGGGCT GTCGTTCGCG AAATACGCCG ATCTTTTGTG GTGGGAGACC TCCAAGCCCG ACCTGGAAGG CGCGCGCGCG TTCGCGGAAG CCGTCAGGAA GGTCTATCCG GACAAGATGC TGGCTTACAA CTGCTCGCCC TCGTTCAACT GGGAAGCCAA CCTCGACAAG GCCGCGATCG CGCACTTCCA GAAGGAAATC GCGGCGATGG GCTACAAGTT TCAGTTTGTC ACGCTGGCGG GCTTCCACTC GCTCAACCAT GGCATGTTCG AACTGGCGCG CGGTTACAAG GCCGAAGGCA TGGCCGCCTA TTCCCGTCTC CAGCAGGCCG AGTTCGCCTC GGAGAAGTTC GGATATTCGG CGACCCGCCA TCAGCGCGAG GTCGGCACCG GCTACTTCGA TCTGGTTTCG GCCACGATCA CGGGAGGCCA GTCGTCGACC ACTGCGCTTC ACGATTCCAC GGAAGCCGCG CAGTTCAAGT CTCAGGGCTC ACCGATCAAC GTTCAGGCCG CTGAGTAA
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Protein sequence | MSRTFEQIVL APKGRFEGIS RPYAPEDVER LRGSVQIEHT LAERGANRLW KQLNEMPYVN SLGAVTGNQA MQQARAGLPA IYLSGWQVAA DANTAGAMYP DQSLYPANAG PELCRRINRT FQRADQIEHA EGGAKIDWFV PIVADAEAGF GGPLNAFEIM KAYIEAGAAG VHFEDQLASE KKCGHLGGKV LIPTAEHERN LIAARLAADV CGVPTLVLAR TDAESAKLIT SDIDERDHEF ITGERTAEGF YRLKPGTGLD HCIKRGLSFA KYADLLWWET SKPDLEGARA FAEAVRKVYP DKMLAYNCSP SFNWEANLDK AAIAHFQKEI AAMGYKFQFV TLAGFHSLNH GMFELARGYK AEGMAAYSRL QQAEFASEKF GYSATRHQRE VGTGYFDLVS ATITGGQSST TALHDSTEAA QFKSQGSPIN VQAAE
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