Gene Nwi_2985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2985 
Symbol 
ID3675369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp3227976 
End bp3229283 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content64% 
IMG OID637714551 
Productisocitrate lyase 
Protein accessionYP_319587 
Protein GI75677166 
COG category[C] Energy production and conversion 
COG ID[COG2224] Isocitrate lyase 
TIGRFAM ID[TIGR01346] isocitrate lyase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.54257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGGA CCTTTGAGCA GATCGTTCTC GCCCCCAAGG GGCGGTTTGA GGGGATCAGC 
CGTCCCTATG CTCCGGAGGA CGTCGAACGG CTGCGCGGCT CGGTCCAGAT CGAGCATACC
CTGGCGGAGA GGGGCGCGAA CCGGCTTTGG AAGCAACTCA ACGAAATGCC TTATGTGAAT
TCGCTCGGCG CCGTCACCGG CAATCAGGCG ATGCAGCAGG CGCGCGCCGG TTTGCCCGCC
ATCTATCTCT CCGGCTGGCA GGTCGCCGCC GACGCCAACA CCGCGGGCGC GATGTATCCG
GATCAGAGCC TCTATCCGGC TAACGCCGGT CCTGAACTCT GTCGCCGCAT CAACCGCACC
TTCCAGCGCG CCGACCAGAT CGAGCACGCC GAGGGTGGGG CGAAGATCGA CTGGTTCGTA
CCTATCGTCG CCGACGCCGA AGCGGGTTTC GGCGGGCCGC TCAACGCGTT CGAGATCATG
AAAGCCTATA TCGAGGCGGG CGCGGCCGGC GTCCACTTCG AGGACCAGCT CGCATCGGAA
AAGAAGTGCG GGCACTTGGG CGGCAAGGTG CTGATCCCGA CCGCGGAGCA TGAGCGCAAT
CTGATCGCGG CGCGGCTTGC GGCCGACGTC TGCGGGGTGC CGACTCTCGT GCTGGCGCGC
ACCGATGCGG AGAGCGCGAA GCTGATCACG TCGGACATTG ACGAGCGCGA TCACGAGTTC
ATCACCGGCG AACGCACGGC GGAAGGCTTC TATCGCCTGA AGCCTGGCAC CGGCCTTGAC
CATTGCATCA AGCGCGGGCT GTCGTTCGCG AAATACGCCG ATCTTTTGTG GTGGGAGACC
TCCAAGCCCG ACCTGGAAGG CGCGCGCGCG TTCGCGGAAG CCGTCAGGAA GGTCTATCCG
GACAAGATGC TGGCTTACAA CTGCTCGCCC TCGTTCAACT GGGAAGCCAA CCTCGACAAG
GCCGCGATCG CGCACTTCCA GAAGGAAATC GCGGCGATGG GCTACAAGTT TCAGTTTGTC
ACGCTGGCGG GCTTCCACTC GCTCAACCAT GGCATGTTCG AACTGGCGCG CGGTTACAAG
GCCGAAGGCA TGGCCGCCTA TTCCCGTCTC CAGCAGGCCG AGTTCGCCTC GGAGAAGTTC
GGATATTCGG CGACCCGCCA TCAGCGCGAG GTCGGCACCG GCTACTTCGA TCTGGTTTCG
GCCACGATCA CGGGAGGCCA GTCGTCGACC ACTGCGCTTC ACGATTCCAC GGAAGCCGCG
CAGTTCAAGT CTCAGGGCTC ACCGATCAAC GTTCAGGCCG CTGAGTAA
 
Protein sequence
MSRTFEQIVL APKGRFEGIS RPYAPEDVER LRGSVQIEHT LAERGANRLW KQLNEMPYVN 
SLGAVTGNQA MQQARAGLPA IYLSGWQVAA DANTAGAMYP DQSLYPANAG PELCRRINRT
FQRADQIEHA EGGAKIDWFV PIVADAEAGF GGPLNAFEIM KAYIEAGAAG VHFEDQLASE
KKCGHLGGKV LIPTAEHERN LIAARLAADV CGVPTLVLAR TDAESAKLIT SDIDERDHEF
ITGERTAEGF YRLKPGTGLD HCIKRGLSFA KYADLLWWET SKPDLEGARA FAEAVRKVYP
DKMLAYNCSP SFNWEANLDK AAIAHFQKEI AAMGYKFQFV TLAGFHSLNH GMFELARGYK
AEGMAAYSRL QQAEFASEKF GYSATRHQRE VGTGYFDLVS ATITGGQSST TALHDSTEAA
QFKSQGSPIN VQAAE