Gene Nwi_2980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2980 
Symbol 
ID3675364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp3222711 
End bp3223913 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content61% 
IMG OID637714546 
Productaspartate aminotransferase 
Protein accessionYP_319582 
Protein GI75677161 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.181934 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTCC TGTCCGCCGC GCTCGATCGT GTGAAGCCGT CCGCGACCAT CGCGGTCACG 
GATAAGGCAC GTCAGCTCAA AGCGGAGGGA CGAAATGTCA TCGGCCTCGG CGCGGGCGAA
CCGGACTTCG ATACGCCGGC CAATATCAAG TTGGCCGCTG TTCATGCCAT CGAGGCGGGC
AAGACCAAAT ATACGGCGGT CGATGGCATT GCGGAATTGA AGCAGGCGAT TATCGCCAAG
TTTCAGCGCG ACAACGAACT GACCTACCAG CCGAACCAGA TCATCGTCGG CACCGGCGGC
AAGCAGGTCC TCTACAACGC GCTGATGGCG ACCATCAATC CCGGTGACGA GGTGGTCATC
CCCGCGCCTT ACTGGGTCAG CTATCCCGAG ATGGTGGCGC TGGCGGGAGG CGAGCCCGTG
CCGGTGATCT GCACGGCGGA GTTCGGATTC AAGCTGCAGC CCGAGGCTCT GGAAAGAGCG
ATCACGCCGA AGACCAAGTG GATCATTCTC AATTCGCCGT CGAACCCGAC CGGCGCGGCC
TACACGCGGG CCGAATTGAA GGCGCTGACC GATGTGCTGG TGAAGCATCC CCACGTCTGG
GTCATGACCG ACGATATGTA CGAGCATCTG ATCTATGACG AGTTTGAATT CACCACTCCG
GCGCAGGTCG AGCCGAAACT GTTCGATCGC ACCCTGACGG TCAACGGCGT GTCGAAGGCC
TACTGCATGA CCGGCTGGCG CATCGGCTAT GCGGGGGGGC CCGCGCAACT GATCAAGGCG
ATGGCGACGA TCCAGTCGCA ATCGACATCG AACCCGTCGT CCATTTCACA ATGGGCGGCG
GTGGAAGCCC TGAACGGTCC GCAAGGGTTC ATCGAAGCGA ACAACAAGGT ATTCAAGCAG
CGCCGCGACC TTGTGGTGGC GATGCTGAAC CAGGCCAGCG GCATAGATTG TCCCCGGCCG
GAAGGCGCGT TCTACGTCTA TCCGTCCTGC GCCGGCGCCA TCGGCAAGAC CACGCCGTCT
GGCAAGACGC TCGAGACGGA CGAGGATTTT GTCACCGAAC TGCTGGAGGC CGAGGGCGTC
GCGGTGGTGC ATGGGTCGGC GTTTGGCTTA GGGCCGGCGT TTCGTATCTC CTATGCGACC
AAGACGGCGG ATCTTGAAGA AGCCTGCAAA CGGATTCAGC GGTTCTGTGG CAGTCTGCGC
TGA
 
Protein sequence
MSFLSAALDR VKPSATIAVT DKARQLKAEG RNVIGLGAGE PDFDTPANIK LAAVHAIEAG 
KTKYTAVDGI AELKQAIIAK FQRDNELTYQ PNQIIVGTGG KQVLYNALMA TINPGDEVVI
PAPYWVSYPE MVALAGGEPV PVICTAEFGF KLQPEALERA ITPKTKWIIL NSPSNPTGAA
YTRAELKALT DVLVKHPHVW VMTDDMYEHL IYDEFEFTTP AQVEPKLFDR TLTVNGVSKA
YCMTGWRIGY AGGPAQLIKA MATIQSQSTS NPSSISQWAA VEALNGPQGF IEANNKVFKQ
RRDLVVAMLN QASGIDCPRP EGAFYVYPSC AGAIGKTTPS GKTLETDEDF VTELLEAEGV
AVVHGSAFGL GPAFRISYAT KTADLEEACK RIQRFCGSLR