| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_2977 |
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| Symbol | |
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| ID | 3675851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | - |
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| Start bp | 3218479 |
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| End bp | 3219318 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637714543 |
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| Product | shikimate/quinate 5-dehydrogenase |
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| Protein accession | YP_319579 |
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| Protein GI | 75677158 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.188578 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACAG CCGAGACAAC AGGCCGGGCC GCCTGCCTGA TCGGATGGCC CGCGGCGCAT
TCGCGCTCGC CGCTGATCCA TCACTATTGG CTGCGCTTGC ACGGAATAAC GGGGGGCTAC
AGCATCGAGG CGATTCCGCC CGAGGGATTC GCTGAATTCG TCATGCATCT TTCAACGCAC
GGCTTCGCGG GCGCCAATGT CACCATTCCG CATAAGGAGC GGGCGCTGCA ACTCACGGAG
CCGGATGACC GCGCGCGAGC CGTCGGCGCG GCCAACACGC TCTATTATGA GGGCGCCGTT
CTGCGGTCCA CCAATACCGA CGTCGAGGGT TTTATCAGCA ATCTGGACGT TGCGGCGCCG
AGCTGGGATC GCACCGGGGA CGCGCTGGTG CTGGGCGCCG GCGGGGCGTC GCGGGCCGTG
GTTTTCGGCC TGGTCGAGCG CGGCATCGGG CGCATCCATC TCGCCAACCG CACGGTGGAA
AGGGCGCGGG TGCTCGCGGA CCAGTTTGGG GCGACCGTTA TCCCGGCGGC CTGGAATACG
CTTGGCGACT TGCTGCCGCG CGTCGGCCTG CTCGTCAACA CCACCTCGCT CGGCATGAAA
GGGCAGCCGC CGCTGGACAT CGAACTGGCG CTGCTGCCGC GGGATGCGGT GGTCGCCGAT
CTGGTCTATG TTCCCCTGGA AACGCCATTG CTGTCCGCGG CGCGGGCGCG GGGCCTCAGG
ACCGCGGACG GGCTCGGGAT GCTGCTGCAT CAGGCGGTGC GCGGGTTCGA ACTGTGGTTC
GGACTGCGTC CCGCGGTGAC GCAGGAGTTG CGCGCGCTGG TCGAAGCCGA TCTTCTATAG
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| Protein sequence | MMTAETTGRA ACLIGWPAAH SRSPLIHHYW LRLHGITGGY SIEAIPPEGF AEFVMHLSTH
GFAGANVTIP HKERALQLTE PDDRARAVGA ANTLYYEGAV LRSTNTDVEG FISNLDVAAP
SWDRTGDALV LGAGGASRAV VFGLVERGIG RIHLANRTVE RARVLADQFG ATVIPAAWNT
LGDLLPRVGL LVNTTSLGMK GQPPLDIELA LLPRDAVVAD LVYVPLETPL LSAARARGLR
TADGLGMLLH QAVRGFELWF GLRPAVTQEL RALVEADLL
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