Gene Nwi_2956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2956 
Symbol 
ID3674559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp3194653 
End bp3196269 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content66% 
IMG OID637714522 
Producthypothetical protein 
Protein accessionYP_319558 
Protein GI75677137 
COG category[S] Function unknown 
COG ID[COG2845] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.48532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGAC CCAGATCGCT GCTTCGCCGA TTGACCCAGC GCGGACCATG GATTGCGCTG 
GCGATTGTTA TCGCCACGCT GGTCGCCGCG CCTGCGTCGG CGCAGCTTTT CGATTTCGGT
TTCGACCGTC CCGCGCGCCG CGGCGGAGGT GGGGGAGGCG GAGGCTGGTT CGGCTCGGAC
AATCCTTTCT TCGCGCCCTT TCAACAACCG CCGCAGAGGC AACCACAACA GCAGCAGCAA
AGGCCGGCCG AAAATTACTC CCACGCGCCG CCGCCTGAAA AGCGCGACAC CGTGTCTGAG
CGCAATGTGC TGGTTCTCGG CGACGCCATG GCCGACTGGC TCGCCTATGG CCTGGAGGAT
GCTCTCAGCG AAACGTCCGA CATGGGCGTG ATCCGCAAAC ACAAGACCGT GTCCGGCCTC
ATCCGCTATC AGCCGAAGGG TGAGCCGGCG GATTGGGCGG CCGCGGCGAA AGCCATTCTT
GCGACCGAAA ATCCGGATGC CATCGTGGTC ATGCTCGGTC TGCAAGACCG CATGTCGATT
CGCGAAGCGC CTGAGAAAGA AAAGAGCGGC AAGCCGGACG ACAGGAAGGC TGACGTGGAC
AAGAAGGAGG GAAGCAATAC CGGCAAGGCG GATGAAGCCG CCGCCGACTC TGACGGCAAG
CCGGCTGATT CCGAACAATC TCCGGACGAG ACCGCGGATC AGCCCGCCGC CTCAAGGACG
AAAAGCGCGC GTTCGCCGAA CGGGGTTGCC GAGTTCCGCA GCGATCGCTG GGTCGAACTC
TACAGCAGGA AGGTCGACAA CATGATCACG GTGCTCAAGT CGAAGGGCGT TCCGGTGTTC
TGGGTCGCCC TGCCTGCCGT GCGCGGTACA AAATCAACCG CCGATATGCT GTTCCTCAAC
TCGCTTTATC GGGACGCCGC GGACAAGGCG GGCATCACCT ACGTCGATAT CTGGGATGGG
TTCGTCGACG AGGCCGGCCG TTATATCCAG CAGGGGCCGG ATTTCGAAGG CCAGATCCGC
CGCCTGCGTT CATATGACGG CGTGTTCTTC ACCAAGGCGG GCTCGCGCAA GCTCGCCCAT
TATGTCGAGC GCGAGATCAC CCGCGTGATG GCGGCGCGGT CGGGGCCGAT CGCGATCCCC
GTCGAGCCTG GCACGCCCGA CACCGACGTC AAACCGGGGC AGCCGGCGCC GCGACCGCTC
GCTGGACCGA TCGTGCCGTT GGTGGCTTCC TCGTTCGGGA GCGACCGGTT GCTCGGCGGT
CCCGGCAGTC ATCCCGCGGC GATCGACGCG CTGGCGGCGC GTACGCTGGT GAGGGGTGAA
CCGTTATCCG CGCCAGCCGG ACGTGCCGAC GATTTCGCCT GGCCGCGGCG GGAGGTCGGC
CTTGAGCCGG CCAAGGGCGA TCCGCCGGTC GCGGCGGCGC CGGAAGGCGC GGGCGCGGCT
TCCGCAGCGA AGCCGAACAG GCCGCGACCT GCTCCTTCCG CTCAGCAAGC GCAGTCGAAC
GGACCATCGG GGTCTCGCGT TTTTTCGCCA GCGCAGGCGG GACGATCTCA GGCGTCGCCA
CGTCCACCGG CTGATTTCGG ACTGCCGGGA TTCTTCTCGG ACCTGTTTTC GCGATAG
 
Protein sequence
MSGPRSLLRR LTQRGPWIAL AIVIATLVAA PASAQLFDFG FDRPARRGGG GGGGGWFGSD 
NPFFAPFQQP PQRQPQQQQQ RPAENYSHAP PPEKRDTVSE RNVLVLGDAM ADWLAYGLED
ALSETSDMGV IRKHKTVSGL IRYQPKGEPA DWAAAAKAIL ATENPDAIVV MLGLQDRMSI
REAPEKEKSG KPDDRKADVD KKEGSNTGKA DEAAADSDGK PADSEQSPDE TADQPAASRT
KSARSPNGVA EFRSDRWVEL YSRKVDNMIT VLKSKGVPVF WVALPAVRGT KSTADMLFLN
SLYRDAADKA GITYVDIWDG FVDEAGRYIQ QGPDFEGQIR RLRSYDGVFF TKAGSRKLAH
YVEREITRVM AARSGPIAIP VEPGTPDTDV KPGQPAPRPL AGPIVPLVAS SFGSDRLLGG
PGSHPAAIDA LAARTLVRGE PLSAPAGRAD DFAWPRREVG LEPAKGDPPV AAAPEGAGAA
SAAKPNRPRP APSAQQAQSN GPSGSRVFSP AQAGRSQASP RPPADFGLPG FFSDLFSR