Gene Nwi_2934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2934 
Symbol 
ID3674289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp3170987 
End bp3172111 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content59% 
IMG OID637714499 
Producttrypsin-like serine protease 
Protein accessionYP_319536 
Protein GI75677115 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACTA TACGTCCATT CGCAGCGTTG CGGCCCATTC TTCTCATCTT GATCATTGTC 
GGGACGTTGC TGCCCTGGTG TCCAGCCGCG GCTCAAATCC CTGATCTGGG TAGTGGGCGG
GTCCCGACAC TTGCTCCGCT GGTACGCGAA GTCACGCCGG CGGTTGTGAA TATCTCCGTT
CGTGGCCGCG TGAAGGAGGA CAATCCTCTT TATCGCGATC CTTTCTTTCG CGATTTTTTT
GACTTGCCGC GACAACTGGA GAGAGAGGTC CAGGCCACGG GATCGGGCGT CATCGTCGAT
GCGCAACGCG GATATATCCT CACCGCCAAC CATGTCGTGG CGCAAATATC GACGGCTCAA
ATCACGACAA AAGACGGCAG AAGGTTCTCG GCCGGGCTGA TCGGGCGCGA TCCAGGAACT
GATATCGCGG TGCTCCAGAT CAAGCGCGGA AACAATCTCA AGGCTATTCG GTTGGGCGAC
AGCGACAAAC TGGAGGTCGG CGACTTCGTG ATAGCTGTCG GCAACCCCTT CGGCCTGGGT
CAGACGGTGA CCTCCGGCCT TGTGAGCGCG CTGGGTCGCA CCGGCCTTGG CAAGCATGGC
TACGAGGACT TCATTCAAAC CGACGCGCCA ATCAATCCCG GCAACTCTGG CGGAGCATTG
ATCAATTTGA AGGGCGAACT CGTCGGAATC AACACCGCGA TCATTTCACC GGGCGGCGGC
AACATCGGAA TCGGCTTTGC CGTACCGATC AATATGGCAC GGCAGGTCAT GGAGCAGATC
GTCGAATACG GCGTCGTGCG GCGCGGCCGT ATCGGCGTAT CGGTACAGGA TCTGAGCACG
GTCAGTTCGG AACCACAAGC TACCGGAAGG AGCGAGGGCG CTCTGATCGC CAGTGTCCTC
CGAGGATCTT CGGCCGAGGC GGCTGGCATT CGCAGAGGCG ATATCATCGT CGCTGCGGAC
GGCGTTCCCA TTCGTAGTGC GGCGCAACTT CGCAATAAGA TCGGACTGGC CCGTATTGGC
GAGCGCGTGC AGCTGACATT CGACCGCAGG GGCACTTTAC ACACAGTCGT CGTCGAGATC
TCCGCTACAA GGAGTGCTCC GGCGGCGTCT TCACTGAGAA GATGA
 
Protein sequence
MITIRPFAAL RPILLILIIV GTLLPWCPAA AQIPDLGSGR VPTLAPLVRE VTPAVVNISV 
RGRVKEDNPL YRDPFFRDFF DLPRQLEREV QATGSGVIVD AQRGYILTAN HVVAQISTAQ
ITTKDGRRFS AGLIGRDPGT DIAVLQIKRG NNLKAIRLGD SDKLEVGDFV IAVGNPFGLG
QTVTSGLVSA LGRTGLGKHG YEDFIQTDAP INPGNSGGAL INLKGELVGI NTAIISPGGG
NIGIGFAVPI NMARQVMEQI VEYGVVRRGR IGVSVQDLST VSSEPQATGR SEGALIASVL
RGSSAEAAGI RRGDIIVAAD GVPIRSAAQL RNKIGLARIG ERVQLTFDRR GTLHTVVVEI
SATRSAPAAS SLRR