| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_2912 |
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| Symbol | |
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| ID | 3675581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | - |
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| Start bp | 3149219 |
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| End bp | 3150475 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637714477 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_319514 |
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| Protein GI | 75677093 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.62912 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGGTC TGGCGTCACT CCGGCGAGTG CGGGAAATCC CGCGGATTGC CATCGGCCTT
GCGAGCGCAT TGGTCCTTGT CGGGACGGCC GCTGTCGTCC TGAACATCGA TCGCGGCAGC
GCCGCCAGAA ATCCGACGCT GGACAGTGAA ATCAAGCAGC CTGACGGAAA GCTGCGGTTG
ACGTCATCGC AATGGGGCAC CGTGACGGTG CAGCCGGTCG AGCAGCACGC GTTCCGCTCC
GAGTTTCGTA CCGAGGGAAA GATCGCGATC GATCAGAACC TGTCGACTCG CATCTTCGCG
CCCTATGCGG GCCGGGTGAC GCAATTGATG GTCGCATCCG GCGATCAGGT TCAGAAAGGC
CAGCTTCTCT TTGTGATCGC GGCGGCCGAT TCCCTGGACG CCCAGAGGGA TTTCGTGGTC
GCCCTGACGA CCCGGAACAA GGCGGTTTCC CAGGTCAACC TCGCGCAGAT CGTCGAGCGG
AGGATGTCGA GCCTGGCCAA GGACAAGGCG GCGTCGCAGA GAGAATGGCA GGAAGCCCAG
ACCAATCTCA CCGCCGCGGA AAACGATTCC CGTTCAGCGG AAATCGCACT TCAGGCCGCG
CGCAACCGGT TGCGGCTCGT CGGGAAAACC GATGCGGAAA TTGACGCGTT CGAGAAGACG
GGGGCGCTGA CGCCCGACGC CCCGGTCTAC GCGCCGCTGG CCGGCACCGT TCTGCATCGC
AAGGTCGGGA TCGGACAGTA TGTCAGCGCC GGAGCCGGCG ATAGCGATCC GGCGCTCCTG
ATCGGAGACA CGTCGAAAGT CTGGATCGTG GCCTATGTCC GCGAGACCGA TGTCGCCAAG
GTGAAGATCG GTGAGCGGCT GACGTTCAAG GTCCTGGCGC AGCCTGACCG GGTGTTCGAG
ACCCGGATCG ACTACGTCGC GCCGGGAATA GACCCGGACA ATCGGCGGCT TCTGGTCCGC
GCCAGCGTCG ATAACGCGGA TGGACTGCTC AAACCCGAGA TGTTTGCGAG TGTCACGATC
GTCGCCAGCG AGGGAGCGCC AATGCCGGCG ATCCCTCTTG AGTCGGTCAT CTATGAAGGA
AGCAATGCGC ATGTCTGGAT CGTCGGCGAC GATCAAAGCG TGGAATTGCG TCAGATCACG
TTGGGTCAAT CAGACGGACG GCTGATCCAG GTGTTGGACG GGCTCCATCC GGGCGAGAAG
ATCGTCACCC GCGGCAGTCT GTTCATCGAC CGGATGACAG TTGCCAAACA GACCTGA
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| Protein sequence | MRGLASLRRV REIPRIAIGL ASALVLVGTA AVVLNIDRGS AARNPTLDSE IKQPDGKLRL
TSSQWGTVTV QPVEQHAFRS EFRTEGKIAI DQNLSTRIFA PYAGRVTQLM VASGDQVQKG
QLLFVIAAAD SLDAQRDFVV ALTTRNKAVS QVNLAQIVER RMSSLAKDKA ASQREWQEAQ
TNLTAAENDS RSAEIALQAA RNRLRLVGKT DAEIDAFEKT GALTPDAPVY APLAGTVLHR
KVGIGQYVSA GAGDSDPALL IGDTSKVWIV AYVRETDVAK VKIGERLTFK VLAQPDRVFE
TRIDYVAPGI DPDNRRLLVR ASVDNADGLL KPEMFASVTI VASEGAPMPA IPLESVIYEG
SNAHVWIVGD DQSVELRQIT LGQSDGRLIQ VLDGLHPGEK IVTRGSLFID RMTVAKQT
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