Gene Nwi_2883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2883 
Symbol 
ID3676713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp3115272 
End bp3115790 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content64% 
IMG OID637714448 
Productfec I like protein 
Protein accessionYP_319485 
Protein GI75677064 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.200402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGGGA CGTTGGTTCA GGAGTTGCAG CAGACGGAGG AAGGCCGGCT TCGCCGGTTT 
TTCCAGCGGC GTTTCCGCAA TCGGGCGGAT GCCGCGGACG CGACTCAGGA AACCTTCCTT
CGGCTGCTGG CGTCGGCGCA GCGCAGCCTG ATCGAGAACC CGCAAGCCTA TCTGTTCCGG
ACCGCGCGCA ATATCGCCGT CGACCAGGAG CGCCTTCAGC AGCGGCGCGC CCAGGTCGAA
TGTCCGATCA CCGATGAGAA GGCCGTTCTC AATATTCCCT GCGACGCGCC GTCCCCGGAG
ATGGCGCTGA TCGACAAGGA GCGGCTCCAT CTCTTCGAGC AGGCGCTGAT CGGGCTTCCC
GAAAGGCCGA GAAAGGTGCT TCTCCTGAGG CGGATCGAGG GCTGGTCCTA TCCCGCCATT
GCCCAGCACC TCGGCGTCTC TCCGAATACG GTCTATAATG ACGTGCGGCT GGCGATGGGA
CATTGCATGA CCGCCATGGA GCGGCCAAAG CGCGGCTAG
 
Protein sequence
MLGTLVQELQ QTEEGRLRRF FQRRFRNRAD AADATQETFL RLLASAQRSL IENPQAYLFR 
TARNIAVDQE RLQQRRAQVE CPITDEKAVL NIPCDAPSPE MALIDKERLH LFEQALIGLP
ERPRKVLLLR RIEGWSYPAI AQHLGVSPNT VYNDVRLAMG HCMTAMERPK RG