| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_2795 |
|---|
| Symbol | |
|---|
| ID | 3677272 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | - |
|---|
| Start bp | 3031658 |
|---|
| End bp | 3032770 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637714362 |
|---|
| Product | 3-isopropylmalate dehydrogenase |
|---|
| Protein accession | YP_319400 |
|---|
| Protein GI | 75676979 |
|---|
| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACCT ACAAGCTGCT GCTCTTGCCC GGTGATGGCA TCGGTCCCGA GGTGATGGCG
GAGGTGAAGC GGCTGGTCGG CTGGCTGGAC GCGCAGGGCA TCGCCAAATT CGAGACCGAA
GAAGGGCTGG TGGGTGGCGC ATCCTATGAT GCCGACAAGG TCAGCATCAC CGACGCCACC
ATGGCGAAGG CGCTCGCCGC CGATGCGGTG TTGTTCGGCG CGGTCGGCGG TCCGAAGTGG
GATTCAGTGC CTTATGAGGT GCGGCCGGAA GCGGGCCTGT TGCGGCTGCG CAAGGATCTC
GCGCTCTACG CCAACCTGCG TCCGGCGATC TGCTATCCGG CGCTCGCGGA ATCCTCCAGC
CTGAAGCCCG AGGTGGTCGA GGGCCTCGAC ATCATGATCG TGCGCGAACT GACCGGCGGC
GTCTATTTCG GAGAGCCGAA GACCGTTACC GATCTCGGCA ACGGCCAGAA GCGCGCCGTC
GATACGCAAG TCTACGACAC CTATGAAATC GAACGCATCG CGCGCGTTGC CTTCGATCTC
GCGCGCAAGC GCCGCAACAA GCTGACCTCG ATGGAAAAGC GCAACGTCAT GAAAACCGGC
GTGCTATGGC ACGAAGTCGT GACGCAGGTG CATCAGCGCG AGTACAAGGA TGTCGCGTTG
CAGCATCAGC TTGCGGACTC CGGCGGTATG CAGCTTGTGC GCTGGCCGAA GCAGTTCGAC
GTGATCGTCA CCGACAACCT GTTCGGCGAC ATGCTGAGCG ACATCGCGGC GATGCTCACC
GGCTCGCTGG GCATGCTGCC ATCCGCCTCG CTCGGCGACA CCGACCCGAA AACCGAAAAG
CGCCGGGCGC TTTATGAGCC GGTGCATGGC TCCGCGCCCG ACATCGCAGG CCAGGGCCTG
GCCAACCCGA TTGCGATGCT GGCCTCGTTC GGGATGGCGC TGCGTTATTC CTTCGACAGG
GGGGATTTGG CGGACAAGCT CGACGCCGCG ATCGCCGCCG TGCTGGCGAA GGGCCTGCGC
ACCGCTGATT TGAAGTCCGA GGGAGCCACC GTGGTCAGCA CATCGCAGAT GGGCGAGGCG
ATCGTGAAGG AGCTTGAGGC GCTGCACGCC TGA
|
|---|
| Protein sequence | MATYKLLLLP GDGIGPEVMA EVKRLVGWLD AQGIAKFETE EGLVGGASYD ADKVSITDAT
MAKALAADAV LFGAVGGPKW DSVPYEVRPE AGLLRLRKDL ALYANLRPAI CYPALAESSS
LKPEVVEGLD IMIVRELTGG VYFGEPKTVT DLGNGQKRAV DTQVYDTYEI ERIARVAFDL
ARKRRNKLTS MEKRNVMKTG VLWHEVVTQV HQREYKDVAL QHQLADSGGM QLVRWPKQFD
VIVTDNLFGD MLSDIAAMLT GSLGMLPSAS LGDTDPKTEK RRALYEPVHG SAPDIAGQGL
ANPIAMLASF GMALRYSFDR GDLADKLDAA IAAVLAKGLR TADLKSEGAT VVSTSQMGEA
IVKELEALHA
|
|---|
| |