Gene Nwi_2793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2793 
Symbol 
ID3677270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp3029712 
End bp3030746 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content60% 
IMG OID637714360 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_319398 
Protein GI75676977 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.430867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTACA AAGTCGCGCT GGTCGGAGCG ACCGGCAATG TCGGGCGTGA AATGCTCAAC 
ATACTGGACG AGCGGAAATT TCCGGCGGAT GAGGTGGTGG CGCTGGCCTC GCGCCGCAGC
GTCGGCACCG AAGTCTCCTA CGGCGACAAA ACCCTGAAAG TCAAAGCGCT GGAAAATCAC
GATTTCAGCG ATACCGACAT TTGTCTGATG TCAGCCGGCG GCGCGGTGTC GAAGGAATGG
TCGCCGAAGA TCGGCGCGGC CGGCGCGGTC GTGATCGACA ATTCGTCAAC ATGGCGGATG
GACCCCGACG TGCCGTTGAT CGTGCCCGAG GTCAACGCCG ATGCGGTGAC CGGCTTCACG
AAAAAGAACA TCATCGCCAA TCCGAACTGC TCGACGGCGC AGCTTGTCGT GGCGCTGAAG
CCCTTGCACG ACAAGGCCGT CATCCAGCGG GTCGTGGTTG CGACCTATCA ATCGGTGTCG
GGCGCCGGCA AGGACGCCAT GGACGAACTG TTCGCGCAGA CCAAGGCGGT CTACACCGCG
AGCGAACTGG TTAACAAAAA GTTTCCGAAG CGTATCGCCT TCAACGTCAT CCCCGAGATC
GACGTGTTCA TGGAGGACGG CTACACCAAG GAAGAATGGA AGATGATGGC GGAGACCAAG
AAGATTCTTG ATCCCAAGAT CAAGCTGACC GCGACCTGTG TGCGGGTGCC GGTGTTCATC
GGCCATTCGG AAGCTGTCAG CATCGAGTTC GAGAAACCGA TCACGGCGGA TGAGGCGCGC
GGCATCCTGC GCAATGCGCC GGGGTGTCTC GTCATCGACA AGCACGAGCC GGGCGGCTAT
GTCACGCCGT ATGAATCGGC CGGTGAAGAC GCGACCTACA TCAGCCGCAT CCGCGAGGAT
GCGACCGTGG AGAACGGTCT GTCGATGTGG GTCGTGTCTG ACAACCTGCG CAAGGGTGCG
GCGCTCAATG CGATCCAGAT CGCCGAGTGC CTGATCAACC GCAAGCTGAT CCGAGCGAAG
CCGAAGGCCG CCTGA
 
Protein sequence
MGYKVALVGA TGNVGREMLN ILDERKFPAD EVVALASRRS VGTEVSYGDK TLKVKALENH 
DFSDTDICLM SAGGAVSKEW SPKIGAAGAV VIDNSSTWRM DPDVPLIVPE VNADAVTGFT
KKNIIANPNC STAQLVVALK PLHDKAVIQR VVVATYQSVS GAGKDAMDEL FAQTKAVYTA
SELVNKKFPK RIAFNVIPEI DVFMEDGYTK EEWKMMAETK KILDPKIKLT ATCVRVPVFI
GHSEAVSIEF EKPITADEAR GILRNAPGCL VIDKHEPGGY VTPYESAGED ATYISRIRED
ATVENGLSMW VVSDNLRKGA ALNAIQIAEC LINRKLIRAK PKAA