| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_2779 |
|---|
| Symbol | |
|---|
| ID | 3675756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | + |
|---|
| Start bp | 3019454 |
|---|
| End bp | 3021004 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637714346 |
|---|
| Product | Signal recognition particle protein |
|---|
| Protein accession | YP_319384 |
|---|
| Protein GI | 75676963 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0541] Signal recognition particle GTPase |
|---|
| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0765286 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGACA ATCTGTCGGA ACGGCTCGGC GGCATTCTCG ATCGGCTGAC GCGGCGCGGC
GCGCTGACGG AAGCCGATGT CGACGCCGCC ATGCGCGAGG TTCGCCGGGC GCTGCTGGAA
GCCGACGTCT CGCTCGACGT GGTGCGCAGC TTTACCGACA AGGTCCGCGA ACAGGCGATC
GGCGCCACCG TCGTCAAATC CGTGACGCCG GGCCAGATGG TGGTGAAGAT CGTTCATGAC
GAACTGATCG CCACGCTCGG CTCCGACGGA CAGACCATCG AACTCAACGC CGTGCCGCCG
GTCATCATCA TGATGGTCGG CCTGCAGGGC TCGGGCAAGA CCACCACGAC CGCGAAACTG
GCGCGGCGGC TGACCGAGCG GGACAAGCGC AAGGTCCTGA TGGCCTCGCT CGACATCTAT
CGTCCGGCAG CGATGGAGCA GCTCGCGGTG CTCGGGCGCG ATCTGGACAT CAAGACGCTG
CCGATCGTCG CCGGGCAGAA ACCGGAGCAG ATCGCGCGCC GCGCGCTGGA GGCCGGTAAG
CTCGGCGGCT ACGACGTGGT GCTGCTCGAC ACCGCCGGCC GCACCACGCT CGACGAAGAC
ATGATGTCCG AGGCGGCGAG CATCAAAACC GCCGCCCACC CGCATGAGGT GCTGCTGGTC
GCGGATTCGC TGACCGGCCA GGACGCGGTC AATCTCGCGC GGTCGTTCGA TGAGCGCGTC
GGCCTCACCG GAATCGTGCT GACCCGCGTC GACGGCGACG GCCGCGGCGG CGCCGCGCTG
TCGATGCGCC AGGTCACCGG CAAGCCGATC AAGCTGATCG GCACCGGCGA GAAGACCGAC
GCGCTGGAGG ATTTCCACCC CTCCCGTATC GCCGGCCGTA TCCTCGGCAT GGGCGACGTG
GTCTCGCTGG TCGAGAAAGC CTCCGCCAAC ATCGACGCCG AAAAAGCCGC GCGCACCACC
GAAAGGATGC GCAAGGGCCA GTTCGACCTC AACGACCTGC GCGAACAGTT GCTGCAGATG
TCCAAAATGG GCGGCATCTC CGGCCTGATG GGCATGATGC CCGGCGTCTC CAAGATGAAG
AACCAGATCG CCGCGGCCGG CCTCGACGAC AGGATCATCA AGCGCCAGGT CGCCGTGATC
GACTCGATGA CGCGGCAGGA ACGCAAGCAT CCCGAAATCC TGAAAGCCAG CCGCAAGCGG
CGCATCGCCG CCGGCGCGGG CCAGAAGGTC GAGGAGATCA ACAAGCTCCT CAAGATGCAT
CGCAGCATGG CCGACATGAT GAAGATGATG GGTGCCGGCA AGCGCGGCCC CTTCGCCGGC
ATCGCGCAGG CCATGGGATT TGGAGGGGGC ATGCCCAGCG CCGAACAGAT GAAGGCGCTC
GCGGACAAAA TGCCGAAAGG CGCCGATGGC CTGCCGCAAC TGCCGAAGGA TCTGCCGGCC
GGATTACGCG GCGGCCTGCC GAATCTTCCC GGCCTCACCG GACTGACGGG CAAACCGACT
CTGCCCGGTC TTGGTAAGCC AGGTCTCGGC TTTCCCCGGA AGAAGAAATG A
|
|---|
| Protein sequence | MFDNLSERLG GILDRLTRRG ALTEADVDAA MREVRRALLE ADVSLDVVRS FTDKVREQAI
GATVVKSVTP GQMVVKIVHD ELIATLGSDG QTIELNAVPP VIIMMVGLQG SGKTTTTAKL
ARRLTERDKR KVLMASLDIY RPAAMEQLAV LGRDLDIKTL PIVAGQKPEQ IARRALEAGK
LGGYDVVLLD TAGRTTLDED MMSEAASIKT AAHPHEVLLV ADSLTGQDAV NLARSFDERV
GLTGIVLTRV DGDGRGGAAL SMRQVTGKPI KLIGTGEKTD ALEDFHPSRI AGRILGMGDV
VSLVEKASAN IDAEKAARTT ERMRKGQFDL NDLREQLLQM SKMGGISGLM GMMPGVSKMK
NQIAAAGLDD RIIKRQVAVI DSMTRQERKH PEILKASRKR RIAAGAGQKV EEINKLLKMH
RSMADMMKMM GAGKRGPFAG IAQAMGFGGG MPSAEQMKAL ADKMPKGADG LPQLPKDLPA
GLRGGLPNLP GLTGLTGKPT LPGLGKPGLG FPRKKK
|
|---|
| |