Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_2773 |
Symbol | |
ID | 3675750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | + |
Start bp | 3012586 |
End bp | 3013128 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637714340 |
Product | RNA polymerase sigma factor |
Protein accession | YP_319378 |
Protein GI | 75676957 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCTCA CAGATTCACT TCGCGACGAA ATTCTGGCAT CGGTGCCAAA CCTGCGCGCT TTTGCGATAT CGCTGAGCGG AAATGGCGAC CGAGCCGACG ATCTCGTGCA GGAAACCCTG CTGCGCGCGC TTGCCAACAT CGATTCGTTT CAGCCAGGCT CGAACCTTCC CGCATGGCTG TTCACGATCC TTCGCAACCT GTTCCGATCC GATTACCGCA AGCGGCGGCG GGAGGTCGAG GATTCAGATG GCAACTATGC GAAAACGCTG AAATCGCAAC CGAGCCAGAA TGCTCATCTG GAGTTCGAGG AATTCCGCGC GGCGCTCGAC AAACTTCCGC AGGATCAGCG GGAGGCCTTG ATCCTCGTGG GTGCTTCAGG GTTCTCCTAC GAGGACGCGG CGAAGATCTG CGGATGCGCG GTCGGCACCA TCAAGAGCCG GGTCAACCGC GCGCGATCGA AGCTCAGCGC CCTGCTGTAT GTCGAGGGCA CGGAGGATTT CGGCCCCGAT GATACGGTCC GGGCCGTCAT CGGCAACCGG TAG
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Protein sequence | MPLTDSLRDE ILASVPNLRA FAISLSGNGD RADDLVQETL LRALANIDSF QPGSNLPAWL FTILRNLFRS DYRKRRREVE DSDGNYAKTL KSQPSQNAHL EFEEFRAALD KLPQDQREAL ILVGASGFSY EDAAKICGCA VGTIKSRVNR ARSKLSALLY VEGTEDFGPD DTVRAVIGNR
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