Gene Nwi_2773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2773 
Symbol 
ID3675750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp3012586 
End bp3013128 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content60% 
IMG OID637714340 
ProductRNA polymerase sigma factor 
Protein accessionYP_319378 
Protein GI75676957 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCTCA CAGATTCACT TCGCGACGAA ATTCTGGCAT CGGTGCCAAA CCTGCGCGCT 
TTTGCGATAT CGCTGAGCGG AAATGGCGAC CGAGCCGACG ATCTCGTGCA GGAAACCCTG
CTGCGCGCGC TTGCCAACAT CGATTCGTTT CAGCCAGGCT CGAACCTTCC CGCATGGCTG
TTCACGATCC TTCGCAACCT GTTCCGATCC GATTACCGCA AGCGGCGGCG GGAGGTCGAG
GATTCAGATG GCAACTATGC GAAAACGCTG AAATCGCAAC CGAGCCAGAA TGCTCATCTG
GAGTTCGAGG AATTCCGCGC GGCGCTCGAC AAACTTCCGC AGGATCAGCG GGAGGCCTTG
ATCCTCGTGG GTGCTTCAGG GTTCTCCTAC GAGGACGCGG CGAAGATCTG CGGATGCGCG
GTCGGCACCA TCAAGAGCCG GGTCAACCGC GCGCGATCGA AGCTCAGCGC CCTGCTGTAT
GTCGAGGGCA CGGAGGATTT CGGCCCCGAT GATACGGTCC GGGCCGTCAT CGGCAACCGG
TAG
 
Protein sequence
MPLTDSLRDE ILASVPNLRA FAISLSGNGD RADDLVQETL LRALANIDSF QPGSNLPAWL 
FTILRNLFRS DYRKRRREVE DSDGNYAKTL KSQPSQNAHL EFEEFRAALD KLPQDQREAL
ILVGASGFSY EDAAKICGCA VGTIKSRVNR ARSKLSALLY VEGTEDFGPD DTVRAVIGNR