Gene Nwi_2710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2710 
Symbol 
ID3674874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2943582 
End bp2945504 
Gene Length1923 bp 
Protein Length640 aa 
Translation table11 
GC content64% 
IMG OID637714277 
Productpeptidase M41, FtsH 
Protein accessionYP_319315 
Protein GI75676894 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0465] ATP-dependent Zn proteases 
TIGRFAM ID[TIGR01241] ATP-dependent metalloprotease FtsH 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCA ATATGCGCAA TTTCGCCCTC TGGGTCATCA TTGTCTTGCT CCTGTTGGCA 
TTGTTCACAT TGTTCCAGAA TCCTGGCCAC CACACGACCG CGCAGGATAT TTCATTCTCG
CAGTTGCTGA CGGAAGTCGA TCAGAACAAT GTTCGCGATG TCGTGATCCA AGGACAGGAG
ATTCGCGGCA ACTTCACCAA CGGCTCCGCT TTCCAGACCT ACGCGCCAAA CGATCCGGGG
CTGGTGAAAA AGCTTTATGA CGCCAAGGTG CAGATCACGG CCAAACCCCC CGGCGAGAGC
GTGCCGTGGT TCGTTTCGCT GCTGGTCTCG TGGCTTCCGT TCATCGCGCT CATCGGCGTG
TGGATTTTCC TGTCGCGCCA GATGCAGGGC GGCGCCGGCA AGGCGATGGG CTTCGGCAAG
TCTCGCGCCA AGATGCTGAC GGAGGCCAAC GGCCGCGTCA CCTTCGAGGA CGTCGCGGGG
GTCGACGAGG CAAAGCAGGA CCTGCAGGAG ATCGTCGAGT TCCTGCGCGA CCCCGGCAAG
TTCCAGCGTC TCGGCGGACG GATCCCGCGC GGCGTGCTGC TGGTCGGTCC TCCCGGCACC
GGTAAGACGC TGATCGCGCG CGCCGTCGCC GGCGAAGCCA ACGTGCCGTT CTTCACCATT
TCGGGATCTG ATTTCGTCGA GATGTTCGTC GGCGTCGGCG CCAGCCGCGT CCGCGACATG
TTCGAGCAGG CCAAGAAGAA CGCGCCCTGC ATCATCTTCA TCGACGAAAT CGATGCTGTC
GGGCGTCATC GCGGCGCGGG TCTCGGCGGC GGCAATGACG AGCGCGAGCA GACGCTGAAC
CAGTTGCTGG TCGAGATGGA CGGCTTCGAG GCCAATGAGG GTGTCATCCT TATCGCGGCG
ACCAACCGGC CCGACGTGCT CGACCCGGCG CTGCTGCGTC CCGGCCGCTT CGATCGTCAG
GTCGTGGTGC CGAATCCGGA CGTCGTCGGA CGCGAGCAGA TTCTCAAGGT CCACGTCCGC
AAGGTGCCGC TGGCGCCGGA CGTCAACCTC AAGACCATCG CGCGCGGTAC GCCCGGTTTC
TCCGGCGCCG ACCTGATGAA TCTCGTCAAC GAGGCCGCGC TGACCGCGGC CCGGCGCAAC
AAGCGCATGG TGACGCAGTC GGAGTTCGAG GAGGCCAAGG ACAAGGTGAT GATGGGTGCC
GAGCGCAAGT CGCTCGTCAT GACCGAGGAA GAGAAGCTGC TGACGGCGTA TCATGAGGGT
GGCCACGCCA TCGTCGGTCT CAACGTCGCC GCCACCGATC CGATCCACAA GGCGACGATT
ATTCCGCGCG GCCGGGCGCT GGGCATGGTG ATGCAGCTCC CCGAGCGCGA CAAGCTGTCG
ATGTCGCTGG AGCAGATGAC CTCCCGGCTC GCGATCATGA TGGGTGGCCG CGTGGCGGAA
GAGATGATCT TCGGCCCGGA AAAGGTGACG TCGGGCGCGG CGTCGGACAT TGATCAGGCG
ACGCGTCTGG CGCGCATGAT GGTGACACGC TGGGGCCTGT CGAAGGAACT CGGCACCGTG
TCCTACGGCG AGAACAACGA TGAGGTGTTC CTCGGGATGC AGGTCAACCG TCAGCAGAAC
GTGTCGGAGG CGACCGCGCA GAAGATCGAT TCCGAAGTCA GGCGTCTGGT CGAGACCGGT
TACAAGGACG CGACCCGCAT TCTCACGGAG AAGCGGGCCG ATCTGGAGGC GCTCGCCAAG
GGTTTGCTTG AATTCGAGAC GTTGACCGGC GACGAGATCA CCGACCTCCT CAACGGTAAG
AAGCCGAACC GGGAATCGGT GCTGGAGCCT GCGACCCCGC GCGCTTCGGC TGTGCCGCCT
GCCGGAAAAG CGCGTCCGCG TCCGGAGCCA GACCCGGGGC TCGAACCGCA GCCGCAGGCT
TGA
 
Protein sequence
MNANMRNFAL WVIIVLLLLA LFTLFQNPGH HTTAQDISFS QLLTEVDQNN VRDVVIQGQE 
IRGNFTNGSA FQTYAPNDPG LVKKLYDAKV QITAKPPGES VPWFVSLLVS WLPFIALIGV
WIFLSRQMQG GAGKAMGFGK SRAKMLTEAN GRVTFEDVAG VDEAKQDLQE IVEFLRDPGK
FQRLGGRIPR GVLLVGPPGT GKTLIARAVA GEANVPFFTI SGSDFVEMFV GVGASRVRDM
FEQAKKNAPC IIFIDEIDAV GRHRGAGLGG GNDEREQTLN QLLVEMDGFE ANEGVILIAA
TNRPDVLDPA LLRPGRFDRQ VVVPNPDVVG REQILKVHVR KVPLAPDVNL KTIARGTPGF
SGADLMNLVN EAALTAARRN KRMVTQSEFE EAKDKVMMGA ERKSLVMTEE EKLLTAYHEG
GHAIVGLNVA ATDPIHKATI IPRGRALGMV MQLPERDKLS MSLEQMTSRL AIMMGGRVAE
EMIFGPEKVT SGAASDIDQA TRLARMMVTR WGLSKELGTV SYGENNDEVF LGMQVNRQQN
VSEATAQKID SEVRRLVETG YKDATRILTE KRADLEALAK GLLEFETLTG DEITDLLNGK
KPNRESVLEP ATPRASAVPP AGKARPRPEP DPGLEPQPQA