Gene Nwi_2708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2708 
Symbol 
ID3675712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2938598 
End bp2939980 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content66% 
IMG OID637714275 
Productcell wall hydrolase, SleB 
Protein accessionYP_319313 
Protein GI75676892 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3773] Cell wall hydrolyses involved in spore germination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTGT TGCGTAACCA ACCGAAGAGC GTGCGTCTTG CGCTCTTCGG TTCGGGTCTT 
TGCTTCTTCG CATTGGTCCC GAATGAAATC GGGTATCAGG ACATCGCATC CCTGCTTGCG
CGACAGCCGG GTGTCGCCGA GCGCTGGCAG AAGCGTGTTT CCGCCAGCGC GGTCAGTTCG
ATTCAGGTCG CGACCTTCAA TTTCGGACGC CCGGTCGGCA CCTCGTCGCC GCGCGCGGCC
ACGCTTCTGC TTGCGAGTCT CGATGAGGGT GTGGGCGCCG TGGTCCGCAA CCGGCTGGCG
CGGCCGCCGC AGCGGTATAG CGCCTCGGAT TTCCCCAGTG TCAATCGGGC GCTGAAGGGG
GACCGTCTCG CTCTCGCCGG GCCGGAGACG CCGCCCGTTG CGCCGACGAA TGCTGCGCCG
CAGGATCCTT CGACGTCGAA TGCGTCGGTG CTGGGGGCAA AGACGGCGGC CGGGCATGGC
GAGCCCGCGA CGCTCGATCC CGAACTGGCG GAAGCCCTGA ACGCACCGCC TTTGCCGCAA
TACGGCGCGT CGCTGTCGCT CGAGGGGCAG CCGTCCGGCG ATCTCGAGGA CGACAGCGCG
GTCGAGGGGT CGCAATCCTC CACCGAGGGG TTCTCCATCA AGACGGCGAG CCTGTACTTC
GGCAATTCGG CGCTGGGTGT CGTCAATGAA GGTCTCGAAC GCTGGCGTCC CGGTGAGGAA
CCCGTGATCG TGATGCCGGC TCCGGATCCC GACATGAAGG TAGCGCTGCC GCCGCGGCGG
GATTCAGCAA GGGCGGGCGA AACCGTGGTT GGCAAGGGCG AGGTCAAGAC GCCGGCCGAG
CGGCTTGGTC TTCTGGATGA CAAGAAGCGC GCCAGGCAGG AAAAATGCCT CGCGGAGGCG
GTTTATTTCG AAGCGCGCGG CGAAGCGGTT CGCGGCCAGA TCGCGGTCGC GCAGGTGGTT
ATGAACCGCG TGTTCTCGGG TTATTATCCG ACCACGGTAT GCGGCGTGGT CTACCAGAAC
GCAGATCGCC GTCTGGCCTG CCAGTTCACG TTCGCCTGCG ACGGCATTCG CGATGTCGTC
ACCGAGCCGG ACATGTGGGA TCGCGCCCGC AGGATCGCCA AGGCCACGCT CGACGGGCGG
CTATGGCTGC CGGAGGTCGG CAAGTCGACG CACTATCACG CCTATTGGGT CCATCCTTCC
TGGGTCCGCG AAATGAAGAA GATGTACCGC ACCGGCGTTC ATACCTTCTA CCGCCCGCGC
GCGTGGGGCG ACGGCCGGGA TGCGCCGAGT TGGGGCGCGA CGGCTCAGAC CGCCGAAATC
TCGGCCAGAC TTGCCGAGGC GGCTCGCAGT TCGGCTGAAC TCGATTCAGG CCGGAGGCGT
TAG
 
Protein sequence
MAVLRNQPKS VRLALFGSGL CFFALVPNEI GYQDIASLLA RQPGVAERWQ KRVSASAVSS 
IQVATFNFGR PVGTSSPRAA TLLLASLDEG VGAVVRNRLA RPPQRYSASD FPSVNRALKG
DRLALAGPET PPVAPTNAAP QDPSTSNASV LGAKTAAGHG EPATLDPELA EALNAPPLPQ
YGASLSLEGQ PSGDLEDDSA VEGSQSSTEG FSIKTASLYF GNSALGVVNE GLERWRPGEE
PVIVMPAPDP DMKVALPPRR DSARAGETVV GKGEVKTPAE RLGLLDDKKR ARQEKCLAEA
VYFEARGEAV RGQIAVAQVV MNRVFSGYYP TTVCGVVYQN ADRRLACQFT FACDGIRDVV
TEPDMWDRAR RIAKATLDGR LWLPEVGKST HYHAYWVHPS WVREMKKMYR TGVHTFYRPR
AWGDGRDAPS WGATAQTAEI SARLAEAARS SAELDSGRRR